5B4F
Sulfur Transferase TtuA in complex with iron sulfur cluster
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000049 | molecular_function | tRNA binding |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0002098 | biological_process | tRNA wobble uridine modification |
| A | 0002143 | biological_process | tRNA wobble position uridine thiolation |
| A | 0002144 | cellular_component | cytosolic tRNA wobble base thiouridylase complex |
| A | 0003723 | molecular_function | RNA binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0008033 | biological_process | tRNA processing |
| A | 0016740 | molecular_function | transferase activity |
| A | 0034227 | biological_process | tRNA thio-modification |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 401 |
| Chain | Residue |
| A | SER55 |
| A | GLY57 |
| A | LYS58 |
| A | ASP59 |
| A | SER60 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 402 |
| Chain | Residue |
| A | LYS9 |
| A | ARG297 |
| A | LYS300 |
| A | ARG312 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 403 |
| Chain | Residue |
| A | VAL2 |
| A | ALA10 |
| A | ARG297 |
| A | LYS301 |
| A | SO4404 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 404 |
| Chain | Residue |
| A | VAL2 |
| A | ARG298 |
| A | LYS301 |
| A | SO4403 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 405 |
| Chain | Residue |
| A | GLU13 |
| A | ARG15 |
| A | SER16 |
| A | SER202 |
| A | GLU205 |
| A | HOH501 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 406 |
| Chain | Residue |
| A | THR281 |
| A | THR282 |
| A | CYS286 |
| A | ALA287 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 407 |
| Chain | Residue |
| A | CYS3 |
| A | CYS6 |
| A | CYS22 |
| A | HIS25 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 408 |
| Chain | Residue |
| A | CYS274 |
| A | CYS277 |
| A | CYS286 |
| A | CYS289 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue SF4 A 409 |
| Chain | Residue |
| A | CYS130 |
| A | CYS133 |
| A | LYS137 |
| A | CYS222 |
| A | ASN224 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28439027","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5B4E","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5B4F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GHA","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28439027","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5B4E","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28439027","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5B4E","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5B4F","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in TtuB)","evidences":[{"source":"PubMed","id":"22467871","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
