5B13
Crystal structure of phycoerythrin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0009507 | cellular_component | chloroplast |
A | 0009535 | cellular_component | chloroplast thylakoid membrane |
A | 0009579 | cellular_component | thylakoid |
A | 0015979 | biological_process | photosynthesis |
A | 0016020 | cellular_component | membrane |
A | 0030089 | cellular_component | phycobilisome |
B | 0009507 | cellular_component | chloroplast |
B | 0009535 | cellular_component | chloroplast thylakoid membrane |
B | 0009579 | cellular_component | thylakoid |
B | 0015979 | biological_process | photosynthesis |
B | 0016020 | cellular_component | membrane |
B | 0030089 | cellular_component | phycobilisome |
C | 0009507 | cellular_component | chloroplast |
C | 0009535 | cellular_component | chloroplast thylakoid membrane |
C | 0009579 | cellular_component | thylakoid |
C | 0015979 | biological_process | photosynthesis |
C | 0016020 | cellular_component | membrane |
C | 0030089 | cellular_component | phycobilisome |
D | 0009507 | cellular_component | chloroplast |
D | 0009535 | cellular_component | chloroplast thylakoid membrane |
D | 0009579 | cellular_component | thylakoid |
D | 0015979 | biological_process | photosynthesis |
D | 0016020 | cellular_component | membrane |
D | 0030089 | cellular_component | phycobilisome |
E | 0009507 | cellular_component | chloroplast |
E | 0009535 | cellular_component | chloroplast thylakoid membrane |
E | 0009579 | cellular_component | thylakoid |
E | 0015979 | biological_process | photosynthesis |
E | 0016020 | cellular_component | membrane |
E | 0030089 | cellular_component | phycobilisome |
F | 0009507 | cellular_component | chloroplast |
F | 0009535 | cellular_component | chloroplast thylakoid membrane |
F | 0009579 | cellular_component | thylakoid |
F | 0015979 | biological_process | photosynthesis |
F | 0016020 | cellular_component | membrane |
F | 0030089 | cellular_component | phycobilisome |
G | 0009507 | cellular_component | chloroplast |
G | 0009535 | cellular_component | chloroplast thylakoid membrane |
G | 0009579 | cellular_component | thylakoid |
G | 0015979 | biological_process | photosynthesis |
G | 0016020 | cellular_component | membrane |
G | 0030089 | cellular_component | phycobilisome |
H | 0009507 | cellular_component | chloroplast |
H | 0009535 | cellular_component | chloroplast thylakoid membrane |
H | 0009579 | cellular_component | thylakoid |
H | 0015979 | biological_process | photosynthesis |
H | 0016020 | cellular_component | membrane |
H | 0030089 | cellular_component | phycobilisome |
I | 0009507 | cellular_component | chloroplast |
I | 0009535 | cellular_component | chloroplast thylakoid membrane |
I | 0009579 | cellular_component | thylakoid |
I | 0015979 | biological_process | photosynthesis |
I | 0016020 | cellular_component | membrane |
I | 0030089 | cellular_component | phycobilisome |
J | 0009507 | cellular_component | chloroplast |
J | 0009535 | cellular_component | chloroplast thylakoid membrane |
J | 0009579 | cellular_component | thylakoid |
J | 0015979 | biological_process | photosynthesis |
J | 0016020 | cellular_component | membrane |
J | 0030089 | cellular_component | phycobilisome |
K | 0009507 | cellular_component | chloroplast |
K | 0009535 | cellular_component | chloroplast thylakoid membrane |
K | 0009579 | cellular_component | thylakoid |
K | 0015979 | biological_process | photosynthesis |
K | 0016020 | cellular_component | membrane |
K | 0030089 | cellular_component | phycobilisome |
L | 0009507 | cellular_component | chloroplast |
L | 0009535 | cellular_component | chloroplast thylakoid membrane |
L | 0009579 | cellular_component | thylakoid |
L | 0015979 | biological_process | photosynthesis |
L | 0016020 | cellular_component | membrane |
L | 0030089 | cellular_component | phycobilisome |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 17 |
Details | binding site for residue CYC A 201 |
Chain | Residue |
A | LYS43 |
A | HOH304 |
A | HOH312 |
A | HOH319 |
A | HOH346 |
A | HOH349 |
A | HOH401 |
D | CYC201 |
E | CYC201 |
A | LEU44 |
A | ASN47 |
A | GLU54 |
A | ARG137 |
A | CYS139 |
A | ARG142 |
A | MET144 |
A | TYR152 |
site_id | AC2 |
Number of Residues | 26 |
Details | binding site for residue CYC A 202 |
Chain | Residue |
A | PHE60 |
A | LEU66 |
A | ALA72 |
A | GLY73 |
A | LYS78 |
A | LYS81 |
A | CYS82 |
A | ARG84 |
A | ASP85 |
A | HIS88 |
A | TYR89 |
A | TRP108 |
A | TYR117 |
A | LEU120 |
A | LEU122 |
A | SER126 |
A | TYR127 |
A | HOH321 |
A | HOH336 |
A | HOH366 |
A | HOH379 |
K | ILE67 |
K | THR75 |
K | ASN76 |
K | MET79 |
K | HOH338 |
site_id | AC3 |
Number of Residues | 17 |
Details | binding site for residue CYC G 201 |
Chain | Residue |
G | MET59 |
G | ASN72 |
G | CYS73 |
G | ARG77 |
G | ARG78 |
G | ALA81 |
G | CYS82 |
G | ASP85 |
G | ILE88 |
G | ARG108 |
G | LEU113 |
G | LEU120 |
G | VAL122 |
G | PRO123 |
G | SER127 |
G | HOH309 |
G | HOH368 |
site_id | AC4 |
Number of Residues | 21 |
Details | binding site for residue CYC G 202 |
Chain | Residue |
A | LEU24 |
A | GLU25 |
A | GLN28 |
C | ARG33 |
C | GLN147 |
G | ASN35 |
G | LYS36 |
G | LEU38 |
G | ASP39 |
G | VAL142 |
G | SER143 |
G | CYS153 |
G | PRO154 |
G | ASP155 |
G | GLY156 |
G | CYS158 |
G | HOH304 |
G | HOH312 |
G | HOH325 |
G | HOH353 |
G | HOH397 |
site_id | AC5 |
Number of Residues | 17 |
Details | binding site for residue PUB G 203 |
Chain | Residue |
G | CYS50 |
G | ASP54 |
G | GLY58 |
G | CYS61 |
G | GLU62 |
G | ILE133 |
G | SER137 |
G | THR145 |
G | ALA146 |
G | SER147 |
G | ASP148 |
G | HOH318 |
G | HOH336 |
G | HOH362 |
G | HOH370 |
K | ASN125 |
K | SER177 |
site_id | AC6 |
Number of Residues | 19 |
Details | binding site for Di-peptide CYC B 201 and CYS B 139 |
Chain | Residue |
B | LEU44 |
B | ASN47 |
B | GLU54 |
B | ARG137 |
B | LEU138 |
B | VAL140 |
B | PRO141 |
B | ARG142 |
B | ASP143 |
B | MET144 |
B | TYR152 |
B | HOH306 |
B | HOH327 |
B | HOH351 |
B | HOH355 |
B | HOH394 |
C | PRO141 |
C | ARG142 |
B | LYS43 |
site_id | AC7 |
Number of Residues | 26 |
Details | binding site for Di-peptide CYC B 202 and CYS B 82 |
Chain | Residue |
B | PHE60 |
B | ALA72 |
B | GLY73 |
B | LYS78 |
B | VAL79 |
B | ASN80 |
B | LYS81 |
B | TYR83 |
B | ARG84 |
B | ASP85 |
B | VAL86 |
B | HIS88 |
B | TYR89 |
B | TRP108 |
B | TYR117 |
B | LEU120 |
B | LEU122 |
B | SER126 |
B | TYR127 |
B | HOH364 |
B | HOH366 |
L | ILE67 |
L | THR75 |
L | ASN76 |
L | MET79 |
L | HOH334 |
site_id | AC8 |
Number of Residues | 15 |
Details | binding site for Di-peptide CYC C 201 and CYS C 139 |
Chain | Residue |
C | LYS43 |
C | LEU44 |
C | ASN47 |
C | GLU54 |
C | ARG137 |
C | LEU138 |
C | VAL140 |
C | ARG142 |
C | ASP143 |
C | MET144 |
C | TYR152 |
C | HOH311 |
C | HOH330 |
C | HOH390 |
F | PRO141 |
site_id | AC9 |
Number of Residues | 27 |
Details | binding site for Di-peptide CYC C 202 and CYS C 82 |
Chain | Residue |
C | PHE60 |
C | LEU66 |
C | ALA72 |
C | GLY73 |
C | LYS78 |
C | VAL79 |
C | ASN80 |
C | LYS81 |
C | TYR83 |
C | ARG84 |
C | ASP85 |
C | VAL86 |
C | HIS88 |
C | TYR89 |
C | TRP108 |
C | TYR117 |
C | LEU120 |
C | LEU122 |
C | SER126 |
C | TYR127 |
C | HOH320 |
C | HOH356 |
C | HOH363 |
H | ILE67 |
H | THR75 |
H | ASN76 |
H | MET79 |
site_id | AD1 |
Number of Residues | 16 |
Details | binding site for Di-peptide CYC D 201 and CYS D 139 |
Chain | Residue |
A | CYC201 |
D | LYS43 |
D | LEU44 |
D | ASN47 |
D | GLU54 |
D | ARG137 |
D | LEU138 |
D | VAL140 |
D | PRO141 |
D | ARG142 |
D | ASP143 |
D | MET144 |
D | TYR152 |
D | HOH302 |
D | HOH304 |
D | HOH324 |
site_id | AD2 |
Number of Residues | 27 |
Details | binding site for Di-peptide CYC D 202 and CYS D 82 |
Chain | Residue |
D | PHE60 |
D | ALA72 |
D | GLY73 |
D | LYS78 |
D | VAL79 |
D | ASN80 |
D | LYS81 |
D | TYR83 |
D | ARG84 |
D | ASP85 |
D | VAL86 |
D | HIS88 |
D | TYR89 |
D | TRP108 |
D | TYR117 |
D | LEU120 |
D | LEU122 |
D | PRO123 |
D | SER126 |
D | TYR127 |
D | HOH323 |
G | SER57 |
G | ILE60 |
G | ILE67 |
G | THR75 |
G | ASN76 |
G | MET79 |
site_id | AD3 |
Number of Residues | 18 |
Details | binding site for Di-peptide CYC E 201 and CYS E 139 |
Chain | Residue |
A | CYC201 |
E | LEU44 |
E | ASN47 |
E | GLU54 |
E | ARG137 |
E | LEU138 |
E | VAL140 |
E | ARG142 |
E | ASP143 |
E | MET144 |
E | TYR152 |
E | HOH302 |
E | HOH313 |
E | HOH354 |
E | HOH373 |
E | HOH378 |
E | HOH379 |
E | HOH400 |
site_id | AD4 |
Number of Residues | 26 |
Details | binding site for Di-peptide CYC E 202 and CYS E 82 |
Chain | Residue |
E | PHE60 |
E | ALA72 |
E | GLY73 |
E | LYS78 |
E | VAL79 |
E | ASN80 |
E | LYS81 |
E | TYR83 |
E | ARG84 |
E | ASP85 |
E | VAL86 |
E | HIS88 |
E | TYR89 |
E | TRP108 |
E | TYR117 |
E | LEU120 |
E | LEU122 |
E | SER126 |
E | TYR127 |
E | HOH301 |
E | HOH351 |
E | HOH372 |
J | ILE67 |
J | THR75 |
J | ASN76 |
J | MET79 |
site_id | AD5 |
Number of Residues | 19 |
Details | binding site for Di-peptide CYC F 201 and CYS F 139 |
Chain | Residue |
B | GLU39 |
B | PRO141 |
F | LYS43 |
F | LEU44 |
F | ASN47 |
F | GLU54 |
F | ARG137 |
F | LEU138 |
F | VAL140 |
F | ARG142 |
F | ASP143 |
F | MET144 |
F | TYR152 |
F | HOH310 |
F | HOH314 |
F | HOH315 |
F | HOH359 |
F | HOH367 |
F | HOH379 |
site_id | AD6 |
Number of Residues | 25 |
Details | binding site for Di-peptide CYC F 202 and CYS F 82 |
Chain | Residue |
F | PHE60 |
F | ALA72 |
F | LYS78 |
F | VAL79 |
F | ASN80 |
F | LYS81 |
F | TYR83 |
F | ARG84 |
F | ASP85 |
F | VAL86 |
F | HIS88 |
F | TYR89 |
F | TRP108 |
F | TYR117 |
F | LEU120 |
F | LEU122 |
F | SER126 |
F | TYR127 |
F | HOH318 |
F | HOH377 |
I | ILE67 |
I | TYR74 |
I | THR75 |
I | ASN76 |
I | MET79 |
site_id | AD7 |
Number of Residues | 20 |
Details | binding site for Di-peptide CYC H 201 and CYS H 82 |
Chain | Residue |
H | MET59 |
H | ASN72 |
H | CYS73 |
H | ARG77 |
H | ARG78 |
H | MET79 |
H | ALA80 |
H | ALA81 |
H | LEU83 |
H | ARG84 |
H | ASP85 |
H | GLY86 |
H | ILE88 |
H | ARG108 |
H | LEU113 |
H | LEU120 |
H | SER127 |
H | HOH307 |
H | HOH339 |
H | HOH347 |
site_id | AD8 |
Number of Residues | 25 |
Details | binding site for Di-peptide CYC H 202 and CYS H 158 |
Chain | Residue |
B | LEU24 |
B | GLN28 |
D | ARG33 |
D | GLN147 |
D | GLU151 |
H | ASN35 |
H | LYS36 |
H | LEU38 |
H | ASP39 |
H | VAL142 |
H | SER143 |
H | GLY144 |
H | CYS153 |
H | PRO154 |
H | ASP155 |
H | GLY156 |
H | ASP157 |
H | SER159 |
H | ALA160 |
H | LEU161 |
H | ALA162 |
H | HOH302 |
H | HOH311 |
H | HOH319 |
H | HOH336 |
site_id | AD9 |
Number of Residues | 23 |
Details | binding site for Di-peptide PUB H 203 and CYS H 61 |
Chain | Residue |
H | CYS50 |
H | ASP54 |
H | SER57 |
H | GLY58 |
H | MET59 |
H | ILE60 |
H | GLU62 |
H | ASN63 |
H | ARG129 |
H | ALA136 |
H | SER137 |
H | THR145 |
H | ALA146 |
H | SER147 |
H | ASP148 |
H | HOH304 |
H | HOH312 |
H | HOH322 |
H | HOH341 |
H | HOH346 |
H | HOH362 |
H | HOH376 |
I | ASN63 |
site_id | AE1 |
Number of Residues | 24 |
Details | binding site for Di-peptide PUB H 203 and CYS H 50 |
Chain | Residue |
D | HOH335 |
H | ASN47 |
H | ALA48 |
H | SER49 |
H | ILE51 |
H | VAL52 |
H | SER53 |
H | ASP54 |
H | SER57 |
H | GLY58 |
H | CYS61 |
H | GLU62 |
H | ARG129 |
H | ALA136 |
H | SER137 |
H | THR145 |
H | ALA146 |
H | SER147 |
H | ASP148 |
H | HOH312 |
H | HOH322 |
H | HOH341 |
H | HOH346 |
H | HOH362 |
site_id | AE2 |
Number of Residues | 20 |
Details | binding site for Di-peptide CYC I 201 and CYS I 82 |
Chain | Residue |
I | MET59 |
I | ASN72 |
I | CYS73 |
I | ARG77 |
I | ARG78 |
I | MET79 |
I | ALA80 |
I | ALA81 |
I | LEU83 |
I | ARG84 |
I | ASP85 |
I | GLY86 |
I | ILE88 |
I | ARG108 |
I | LEU113 |
I | LEU120 |
I | VAL122 |
I | SER127 |
I | HOH304 |
I | HOH328 |
site_id | AE3 |
Number of Residues | 27 |
Details | binding site for Di-peptide CYC I 202 and CYS I 158 |
Chain | Residue |
A | ARG33 |
A | GLN147 |
C | LEU24 |
C | GLU25 |
C | GLN28 |
E | SER64 |
E | HOH332 |
I | ASN35 |
I | LYS36 |
I | LEU38 |
I | ASP39 |
I | VAL142 |
I | SER143 |
I | CYS153 |
I | PRO154 |
I | GLY156 |
I | ASP157 |
I | SER159 |
I | ALA160 |
I | LEU161 |
I | ALA162 |
I | HOH306 |
I | HOH308 |
I | HOH310 |
I | HOH350 |
I | HOH364 |
I | HOH373 |
site_id | AE4 |
Number of Residues | 17 |
Details | binding site for Di-peptide PUB I 203 and CYS I 61 |
Chain | Residue |
I | CYS50 |
I | ASP54 |
I | SER57 |
I | GLY58 |
I | MET59 |
I | ILE60 |
I | GLU62 |
I | ASN63 |
I | ARG129 |
I | ALA136 |
I | SER137 |
I | PHE141 |
I | THR145 |
I | ALA146 |
I | SER147 |
I | ASP148 |
I | HOH323 |
site_id | AE5 |
Number of Residues | 20 |
Details | binding site for Di-peptide PUB I 203 and CYS I 50 |
Chain | Residue |
I | ASN47 |
I | ALA48 |
I | SER49 |
I | ILE51 |
I | VAL52 |
I | SER53 |
I | ASP54 |
I | GLY58 |
I | CYS61 |
I | GLU62 |
I | ARG129 |
I | ALA136 |
I | SER137 |
I | PHE141 |
I | THR145 |
I | ALA146 |
I | SER147 |
I | ASP148 |
I | HOH323 |
I | HOH363 |
site_id | AE6 |
Number of Residues | 19 |
Details | binding site for Di-peptide CYC J 201 and CYS J 82 |
Chain | Residue |
J | MET59 |
J | ASN72 |
J | CYS73 |
J | ARG77 |
J | ARG78 |
J | MET79 |
J | ALA80 |
J | ALA81 |
J | LEU83 |
J | ARG84 |
J | ASP85 |
J | GLY86 |
J | ILE88 |
J | ARG108 |
J | LEU113 |
J | LEU120 |
J | SER127 |
J | HOH302 |
J | HOH362 |
site_id | AE7 |
Number of Residues | 20 |
Details | binding site for Di-peptide CYC J 202 and CYS J 158 |
Chain | Residue |
B | ARG33 |
B | GLN147 |
D | LEU24 |
D | GLU25 |
D | GLN28 |
J | ASN35 |
J | LYS36 |
J | LEU38 |
J | ASP39 |
J | VAL142 |
J | CYS153 |
J | PRO154 |
J | GLY156 |
J | ASP157 |
J | SER159 |
J | ALA160 |
J | LEU161 |
J | ALA162 |
J | HOH307 |
J | HOH354 |
site_id | AE8 |
Number of Residues | 18 |
Details | binding site for Di-peptide PUB J 203 and CYS J 61 |
Chain | Residue |
J | CYS50 |
J | ASP54 |
J | SER57 |
J | GLY58 |
J | MET59 |
J | ILE60 |
J | GLU62 |
J | ASN63 |
J | ARG129 |
J | ILE133 |
J | ALA136 |
J | SER137 |
J | THR145 |
J | ALA146 |
J | SER147 |
J | ASP148 |
J | HOH318 |
J | HOH364 |
site_id | AE9 |
Number of Residues | 20 |
Details | binding site for Di-peptide PUB J 203 and CYS J 50 |
Chain | Residue |
J | ASN47 |
J | ALA48 |
J | SER49 |
J | ILE51 |
J | VAL52 |
J | SER53 |
J | ASP54 |
J | GLY58 |
J | CYS61 |
J | GLU62 |
J | ARG129 |
J | ILE133 |
J | ALA136 |
J | SER137 |
J | THR145 |
J | ALA146 |
J | SER147 |
J | ASP148 |
J | HOH364 |
J | HOH374 |
site_id | AF1 |
Number of Residues | 20 |
Details | binding site for Di-peptide CYC K 201 and CYS K 82 |
Chain | Residue |
K | MET59 |
K | ASN72 |
K | CYS73 |
K | ARG77 |
K | ARG78 |
K | MET79 |
K | ALA80 |
K | ALA81 |
K | LEU83 |
K | ARG84 |
K | ASP85 |
K | GLY86 |
K | ILE88 |
K | ARG108 |
K | LEU113 |
K | LEU120 |
K | VAL122 |
K | PRO123 |
K | SER127 |
K | HOH309 |
site_id | AF2 |
Number of Residues | 22 |
Details | binding site for Di-peptide CYC K 202 and CYS K 158 |
Chain | Residue |
E | LEU24 |
E | GLU25 |
E | GLN28 |
F | ARG33 |
F | GLN147 |
K | ASN35 |
K | LYS36 |
K | LEU38 |
K | ASP39 |
K | VAL142 |
K | SER143 |
K | CYS153 |
K | PRO154 |
K | ASP155 |
K | GLY156 |
K | ASP157 |
K | SER159 |
K | ALA160 |
K | LEU161 |
K | ALA162 |
K | HOH305 |
K | HOH340 |
site_id | AF3 |
Number of Residues | 20 |
Details | binding site for Di-peptide PUB K 203 and CYS K 61 |
Chain | Residue |
K | CYS50 |
K | ASP54 |
K | SER57 |
K | GLY58 |
K | MET59 |
K | ILE60 |
K | GLU62 |
K | ASN63 |
K | ARG129 |
K | ILE133 |
K | SER137 |
K | THR145 |
K | ALA146 |
K | SER147 |
K | ASP148 |
K | HOH313 |
K | HOH349 |
K | HOH365 |
K | HOH372 |
K | HOH381 |
site_id | AF4 |
Number of Residues | 23 |
Details | binding site for Di-peptide PUB K 203 and CYS K 50 |
Chain | Residue |
K | ASN47 |
K | ALA48 |
K | SER49 |
K | ILE51 |
K | VAL52 |
K | SER53 |
K | ASP54 |
K | GLY58 |
K | CYS61 |
K | GLU62 |
K | ARG129 |
K | ILE133 |
K | SER137 |
K | THR145 |
K | ALA146 |
K | SER147 |
K | ASP148 |
K | HOH313 |
K | HOH349 |
K | HOH365 |
K | HOH368 |
K | HOH372 |
K | HOH381 |
site_id | AF5 |
Number of Residues | 19 |
Details | binding site for Di-peptide CYC L 201 and CYS L 82 |
Chain | Residue |
L | MET59 |
L | ASN72 |
L | CYS73 |
L | ARG77 |
L | ARG78 |
L | MET79 |
L | ALA80 |
L | ALA81 |
L | LEU83 |
L | ARG84 |
L | ASP85 |
L | GLY86 |
L | ILE88 |
L | ARG108 |
L | LEU113 |
L | LEU120 |
L | SER127 |
L | HOH343 |
L | HOH351 |
site_id | AF6 |
Number of Residues | 21 |
Details | binding site for Di-peptide CYC L 202 and CYS L 158 |
Chain | Residue |
E | ARG33 |
E | GLN147 |
F | LEU24 |
F | GLU25 |
F | GLN28 |
L | ASN35 |
L | LYS36 |
L | LEU38 |
L | ASP39 |
L | VAL142 |
L | CYS153 |
L | PRO154 |
L | GLY156 |
L | ASP157 |
L | SER159 |
L | ALA160 |
L | LEU161 |
L | ALA162 |
L | HOH309 |
L | HOH312 |
L | HOH369 |
site_id | AF7 |
Number of Residues | 19 |
Details | binding site for Di-peptide PUB L 203 and CYS L 61 |
Chain | Residue |
B | GLU77 |
L | CYS50 |
L | ASP54 |
L | SER57 |
L | GLY58 |
L | MET59 |
L | ILE60 |
L | GLU62 |
L | ASN63 |
L | ARG129 |
L | ALA136 |
L | SER137 |
L | THR145 |
L | ALA146 |
L | SER147 |
L | ASP148 |
L | HOH317 |
L | HOH337 |
L | HOH358 |
site_id | AF8 |
Number of Residues | 22 |
Details | binding site for Di-peptide PUB L 203 and CYS L 50 |
Chain | Residue |
E | HOH353 |
L | ASN47 |
L | ALA48 |
L | SER49 |
L | ILE51 |
L | VAL52 |
L | SER53 |
L | ASP54 |
L | SER57 |
L | GLY58 |
L | CYS61 |
L | GLU62 |
L | ARG129 |
L | ALA136 |
L | SER137 |
L | THR145 |
L | ALA146 |
L | SER147 |
L | ASP148 |
L | HOH317 |
L | HOH337 |
L | HOH358 |