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5AKP

Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP from Xanthomonas campestris bound to BV chromophore

Functional Information from GO Data
ChainGOidnamespacecontents
A0006355biological_processregulation of DNA-templated transcription
A0009584biological_processdetection of visible light
A0009881molecular_functionphotoreceptor activity
B0006355biological_processregulation of DNA-templated transcription
B0009584biological_processdetection of visible light
B0009881molecular_functionphotoreceptor activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE TRS A 1632
ChainResidue
AASP171
AGLU172
ATRP174
ALEU275

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE BLA A 900
ChainResidue
ASER198
AASP199
APRO201
ATYR208
AARG214
AARG246
AVAL248
ASER249
AHIS252
ATYR255
ATHR264
AVAL266
ASER280
AHIS282
AHOH2001
ACYS13
AMET166
AILE178
ATYR190
ATYR195

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE TRS B 1633
ChainResidue
BPHE170
BASP171
BGLU172
BTRP174
BLEU275

site_idAC4
Number of Residues23
DetailsBINDING SITE FOR RESIDUE BLA B 900
ChainResidue
BCYS13
BILE18
BMET166
BTYR168
BILE178
BTYR195
BASP199
BILE200
BPRO201
BALA204
BTYR208
BARG214
BARG246
BVAL248
BSER249
BHIS252
BTYR255
BLEU256
BTHR264
BVAL266
BSER280
BHIS282
BHOH2001

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 1633
ChainResidue
AASP239

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: covalent => ECO:0000269|PubMed:27107635
ChainResidueDetails
ACYS13
BCYS13

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PDB entries from 2025-04-02

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