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5AFX

T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-1238

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0046872molecular_functionmetal ion binding
B0004659molecular_functionprenyltransferase activity
B0008299biological_processisoprenoid biosynthetic process
B0016740molecular_functiontransferase activity
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1368
ChainResidue
AASP255
AASP259
APVZ1371

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1369
ChainResidue
AASP103
AASP107
APVZ1371

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1370
ChainResidue
APVZ1371
AASP103
AASP107
AGLN172

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 1368
ChainResidue
BASP255
BASP259
BPVZ1371
BHOH2062

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 1369
ChainResidue
BASP103
BASP107
BPVZ1371

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1370
ChainResidue
BASP103
BASP107
BGLN172
BASP175
BPVZ1371
BHOH2032

site_idAC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE PVZ A 1371
ChainResidue
ATYR99
ALEU100
AASP103
AMET106
AASP107
AARG112
AASP165
AALA169
AGLN172
ALYS212
ATYR216
AASP255
ALYS269
AMG1368
AMG1369
AMG1370
AHOH2028
BASN131
BLEU134

site_idAC8
Number of Residues18
DetailsBINDING SITE FOR RESIDUE PVZ B 1371
ChainResidue
AASN131
AHOH2037
BTYR99
BASP103
BMET106
BASP107
BARG112
BALA169
BGLN172
BLYS212
BTHR213
BTYR216
BASP255
BLYS269
BMG1368
BMG1369
BMG1370
BHOH2069

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGeyFQVqDDVmD
ChainResidueDetails
AMET247-ASP259

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVeDDim..DnsvtRRG
ChainResidueDetails
ALEU100-GLY114

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PDB entries from 2024-07-24

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