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5AEU

Crystal structure of II9 variant of Biphenyl dioxygenase from Burkholderia xenovorans LB400

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0009056biological_processcatabolic process
A0018687molecular_functionbiphenyl 2,3-dioxygenase activity
A0044237biological_processcellular metabolic process
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0051537molecular_function2 iron, 2 sulfur cluster binding
B0009056biological_processcatabolic process
B0018687molecular_functionbiphenyl 2,3-dioxygenase activity
B0019380biological_process3-phenylpropionate catabolic process
B0051213molecular_functiondioxygenase activity
C0005506molecular_functioniron ion binding
C0009056biological_processcatabolic process
C0018687molecular_functionbiphenyl 2,3-dioxygenase activity
C0044237biological_processcellular metabolic process
C0046872molecular_functionmetal ion binding
C0051213molecular_functiondioxygenase activity
C0051537molecular_function2 iron, 2 sulfur cluster binding
D0009056biological_processcatabolic process
D0018687molecular_functionbiphenyl 2,3-dioxygenase activity
D0019380biological_process3-phenylpropionate catabolic process
D0051213molecular_functiondioxygenase activity
E0005506molecular_functioniron ion binding
E0009056biological_processcatabolic process
E0018687molecular_functionbiphenyl 2,3-dioxygenase activity
E0044237biological_processcellular metabolic process
E0046872molecular_functionmetal ion binding
E0051213molecular_functiondioxygenase activity
E0051537molecular_function2 iron, 2 sulfur cluster binding
F0009056biological_processcatabolic process
F0018687molecular_functionbiphenyl 2,3-dioxygenase activity
F0019380biological_process3-phenylpropionate catabolic process
F0051213molecular_functiondioxygenase activity
G0005506molecular_functioniron ion binding
G0009056biological_processcatabolic process
G0018687molecular_functionbiphenyl 2,3-dioxygenase activity
G0044237biological_processcellular metabolic process
G0046872molecular_functionmetal ion binding
G0051213molecular_functiondioxygenase activity
G0051537molecular_function2 iron, 2 sulfur cluster binding
H0009056biological_processcatabolic process
H0018687molecular_functionbiphenyl 2,3-dioxygenase activity
H0019380biological_process3-phenylpropionate catabolic process
H0051213molecular_functiondioxygenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FES A 500
ChainResidue
ACYS100
AHIS102
AARG103
ACYS120
AHIS123
ATRP125

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FE2 A 501
ChainResidue
AASP388
AHOH2059
AHOH2063
AHOH2066
AGLN226
AHIS233
AHIS239

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES C 500
ChainResidue
CCYS100
CHIS102
CARG103
CCYS120
CHIS123
CGLY124
CTRP125

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FE2 C 501
ChainResidue
CGLN226
CHIS233
CHIS239
CASP388
CHOH2020
CHOH2022
CHOH2025

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES E 500
ChainResidue
ECYS100
EHIS102
EARG103
ECYS120
ETYR122
EHIS123
ETRP125

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FE2 E 501
ChainResidue
EGLN226
EHIS233
EHIS239
EASP388
EHOH2012
EHOH2013
EHOH2017

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FES G 500
ChainResidue
GCYS100
GHIS102
GARG103
GCYS120
GHIS123
GTRP125

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FE2 G 501
ChainResidue
GGLN226
GHIS233
GHIS239
GASP388
GHOH2005
GHOH2013

Functional Information from PROSITE/UniProt
site_idPS00570
Number of Residues24
DetailsRING_HYDROXYL_ALPHA Bacterial ring hydroxylating dioxygenases alpha-subunit signature. CrHRGmricrsdaGNakaftCsYH
ChainResidueDetails
ACYS100-HIS123

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00628
ChainResidueDetails
ACYS100
EHIS102
ECYS120
EHIS123
GCYS100
GHIS102
GCYS120
GHIS123
AHIS102
ACYS120
AHIS123
CCYS100
CHIS102
CCYS120
CHIS123
ECYS100

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AHIS233
AHIS239
CHIS233
CHIS239
EHIS233
EHIS239
GHIS233
GHIS239

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PDB entries from 2024-10-30

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