5A8M
Crystal structure of the selenomethionine derivative of beta-glucanase SdGluc5_26A from Saccharophagus degradans
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000272 | biological_process | polysaccharide catabolic process |
| A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| B | 0000272 | biological_process | polysaccharide catabolic process |
| B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| C | 0000272 | biological_process | polysaccharide catabolic process |
| C | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 1365 |
| Chain | Residue |
| A | THR191 |
| A | THR192 |
| A | ARG200 |
| A | ASN231 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL C 1365 |
| Chain | Residue |
| C | THR191 |
| C | THR192 |
| C | ARG200 |
| C | ASN231 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL B 1366 |
| Chain | Residue |
| B | THR192 |
| B | ARG200 |
| B | ASN231 |
| B | HOH2248 |
| B | THR191 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL A 1366 |
| Chain | Residue |
| A | ILE304 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL B 1367 |
| Chain | Residue |
| B | HIS303 |
| B | ILE304 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL C 1366 |
| Chain | Residue |
| C | ILE304 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL B 1368 |
| Chain | Residue |
| B | ARG69 |
| B | ASN100 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL A 1367 |
| Chain | Residue |
| A | ARG69 |
| A | ASN100 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL C 1367 |
| Chain | Residue |
| C | ASN100 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 1368 |
| Chain | Residue |
| A | VAL178 |
| A | VAL181 |
| A | HOH2260 |
| A | HOH2264 |
| A | HOH2267 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG B 1369 |
| Chain | Residue |
| B | VAL178 |
| B | VAL181 |
| B | HOH2236 |
| B | HOH2240 |
| B | HOH2243 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG C 1368 |
| Chain | Residue |
| C | VAL178 |
| C | VAL181 |
| C | HOH2223 |
| C | HOH2226 |
| C | HOH2231 |
| site_id | BC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1369 |
| Chain | Residue |
| A | GLU125 |
| A | ARG128 |
| A | TRP129 |
| A | HOH2202 |
| A | HOH2203 |
| A | HOH2208 |
| A | HOH2430 |
| site_id | BC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 1369 |
| Chain | Residue |
| C | ARG128 |
| C | TRP129 |
| C | HOH2177 |
| site_id | BC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1370 |
| Chain | Residue |
| B | ARG128 |
| B | TRP129 |
| B | HOH2394 |
| site_id | BC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 1370 |
| Chain | Residue |
| A | HIS107 |
| A | TYR157 |
| A | TRP336 |
| A | HOH2218 |
| A | HOH2404 |
| A | HOH2407 |
| A | HOH2431 |
| B | TRP32 |
| site_id | BC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL C 1370 |
| Chain | Residue |
| B | MSE193 |
| B | HOH2257 |
| C | ARG169 |
| C | PHE173 |
| C | HOH2012 |
| C | HOH2217 |
| C | HOH2379 |
| site_id | BC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL B 1371 |
| Chain | Residue |
| B | HIS107 |
| B | TYR157 |
| B | HOH2200 |
| B | HOH2369 |
| B | HOH2395 |
| B | HOH2396 |
| C | TRP32 |
| site_id | CC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL C 1371 |
| Chain | Residue |
| A | TRP32 |
| A | HOH2008 |
| C | HIS107 |
| C | TYR157 |
| C | HOH2192 |
| C | HOH2353 |
| C | HOH2381 |
| site_id | CC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 1371 |
| Chain | Residue |
| A | ARG169 |
| A | PHE173 |
| A | HOH2017 |
| A | HOH2252 |
| A | HOH2254 |
| A | HOH2432 |
| A | HOH2433 |
| C | MSE193 |
| site_id | CC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 1372 |
| Chain | Residue |
| A | MSE193 |
| A | HOH2237 |
| A | HOH2281 |
| B | ARG169 |
| B | PHE173 |
| B | HOH2037 |
| B | HOH2231 |
| B | HOH2397 |
| site_id | CC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 1372 |
| Chain | Residue |
| A | HOH2434 |
| B | GLY299 |
| B | TYR300 |
| B | GLY301 |
| A | THR47 |
| A | GLN48 |
| A | ASP61 |
| A | HOH2061 |
| site_id | CC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PGE A 1373 |
| Chain | Residue |
| A | ARG112 |
| A | ASP158 |
| A | THR159 |
| A | THR160 |
| A | GLU163 |
| A | HOH2241 |
| A | HOH2435 |
| B | LYS162 |
| site_id | CC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE PGE B 1373 |
| Chain | Residue |
| B | ARG112 |
| B | ASP158 |
| B | THR159 |
| B | THR160 |
| B | GLU163 |
| B | HOH2223 |
| B | HOH2398 |
| B | HOH2399 |
| C | LYS162 |
| site_id | CC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PGE C 1372 |
| Chain | Residue |
| A | LYS162 |
| A | HOH2242 |
| C | ARG112 |
| C | ASP158 |
| C | THR159 |
| C | THR160 |
| C | GLU163 |
| C | HOH2210 |
| site_id | CC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE PGE A 1374 |
| Chain | Residue |
| A | GLY194 |
| A | ARG200 |
| site_id | CC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE PGE B 1374 |
| Chain | Residue |
| B | GLY194 |
| B | ARG200 |
| B | HOH2400 |
| site_id | DC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE PGE C 1373 |
| Chain | Residue |
| C | GLY194 |
| C | ARG200 |
| site_id | DC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGE C 1374 |
| Chain | Residue |
| C | TRP85 |
| C | GLN86 |
| C | HIS122 |
| C | GLU125 |
| site_id | DC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE PGE A 1375 |
| Chain | Residue |
| A | TRP85 |
| A | HIS122 |
| A | GLU125 |
| site_id | DC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE PGE B 1375 |
| Chain | Residue |
| B | TRP85 |
| B | HIS122 |
| B | GLU125 |
| site_id | DC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE PGE A 1376 |
| Chain | Residue |
| A | TYR256 |
| A | GLU291 |
| A | HIS303 |
| A | VAL306 |
| A | TRP330 |
| A | HOH2218 |
| A | HOH2436 |
| site_id | DC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PGE B 1376 |
| Chain | Residue |
| B | TYR256 |
| B | GLU291 |
| B | HIS303 |
| B | VAL306 |
| B | TRP330 |
| B | HOH2200 |
| B | HOH2246 |
| B | HOH2401 |
| site_id | DC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE PGE C 1375 |
| Chain | Residue |
| C | TYR256 |
| C | GLU291 |
| C | HIS303 |
| C | VAL306 |
| C | TRP330 |
| C | HOH2192 |
| C | HOH2382 |
| site_id | DC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PGE C 1376 |
| Chain | Residue |
| A | TRP32 |
| A | ASP33 |
| A | HOH2013 |
| C | LYS46 |
| C | ARG82 |
| C | ASP335 |
| site_id | DC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGE B 1377 |
| Chain | Residue |
| B | ASP335 |
| B | ASP343 |
| B | HOH2377 |
| B | HOH2402 |
| site_id | EC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PGE B 1378 |
| Chain | Residue |
| A | ARG82 |
| B | TRP32 |
| B | ASP33 |
| B | LYS46 |
| B | HOH2004 |
| site_id | EC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGE C 1377 |
| Chain | Residue |
| C | PRO334 |
| C | ASP335 |
| C | HOH2363 |
| C | HOH2383 |
| site_id | EC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE PGE B 1379 |
| Chain | Residue |
| B | TYR217 |
| B | LYS221 |
| B | HOH2284 |
| site_id | EC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE PGE A 1377 |
| Chain | Residue |
| A | ASP335 |
| A | HOH2413 |
| site_id | EC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGE B 1380 |
| Chain | Residue |
| B | PRO243 |
| B | GLU247 |
| B | TYR285 |
| B | HOH2311 |
| site_id | EC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PGE A 1378 |
| Chain | Residue |
| A | LYS43 |
| A | LEU45 |
| A | LYS46 |
| A | HOH2051 |
| A | HOH2064 |
| C | ASP33 |
| C | PRO35 |
| C | HOH2005 |
| site_id | EC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE PGE B 1381 |
| Chain | Residue |
| B | PRO262 |
| B | GLU263 |
| B | HOH2330 |
| site_id | EC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGE A 1379 |
| Chain | Residue |
| A | TYR217 |
| A | LYS221 |
| A | GLU247 |
| A | HOH2316 |
