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5A3W

Crystal structure of human PLU-1 (JARID1B) in complex with Pyridine-2, 6-dicarboxylic Acid (PDCA)

Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1754
ChainResidue
ACYS692
ACYS695
ACYS715
AHIS718

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1755
ChainResidue
ACYS706
ACYS708
ACYS723
ACYS725

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 1756
ChainResidue
AASN91
ALEU413
ATHR416
AGLU419
AHOH2049
ALEU90

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PD2 A 1757
ChainResidue
AARG98
ATYR425
ATYR488
APHE496
AHIS499
AGLU501
ALYS517
ATRP519
AHIS587
AMN1758
AHOH2098
AHOH2108
AHOH2109
AHOH2113
AHOH2228

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 1758
ChainResidue
AHIS499
AGLU501
AHIS587
APD21757
AHOH2109

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 1759
ChainResidue
AHIS622
ALYS694
AHIS718
AHOH2150

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE EPE A 1760
ChainResidue
AILE500
ATRP504
AGLU531
AMET534
ALEU541
APHE542
ALEU552
AVAL553
ATYR586
AHIS617
ATYR618
ALEU621
AARG623
AHOH2102
AHOH2107
AHOH2129
AHOH2155
AHOH2229

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1761
ChainResidue
AASP688
AGLU689
AARG690
AGLN691
AVAL693
AGLY711
ALEU712
ALEU713

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1762
ChainResidue
AVAL674
AILE675
ALEU732
AHOH2186
AHOH2190

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1763
ChainResidue
AALA386
AASP387
ALYS390
AMET491
ACYS492
AGLU515
AGLY593
APHE594

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues52
DetailsZN_FING: C5HC2 => ECO:0000269|PubMed:26741168, ECO:0000269|PubMed:27214403, ECO:0000269|PubMed:28262558
ChainResidueDetails
ACYS692-MET744

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P29375
ChainResidueDetails
ATYR425
ASER507
AASN509
ALYS517

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:26741168, ECO:0000305|PubMed:27214403, ECO:0000305|PubMed:28262558
ChainResidueDetails
AHIS499
AGLU501
AHIS587

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS769

226707

PDB entries from 2024-10-30

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