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5A29

Family 2 Pectate Lyase from Vibrio vulnificus

Functional Information from GO Data
ChainGOidnamespacecontents
A0016829molecular_functionlyase activity
A0016837molecular_functioncarbon-oxygen lyase activity, acting on polysaccharides
A0042597cellular_componentperiplasmic space
A0045490biological_processpectin catabolic process
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 601
ChainResidue
AHIS129
AGLU150
AHIS192
AHOH2137
BHIS4
BHIS6

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SRT B 1018
ChainResidue
ATYR394
AHOH2197
AHOH2487
BHIS4
BHIS5
BHIS6
AASN298
ASER299
AARG304

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SRT B 1019
ChainResidue
ALYS152
ASER326
ALYS329
AHOH2240
AHOH2321
BSER7
BSER8
BGLY9
BLEU10
BVAL11
BARG13
BHIS16

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SRT A 1568
ChainResidue
AILE230
ATYR266
ALYS267
APRO277
AVAL278
AILE331
AASN335
AALA336
AGLU339
AALA358
AHOH2266

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1569
ChainResidue
ALEU151
APHE176
AHIS180
AGLY190
AALA232
AHOH2152

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1570
ChainResidue
AARG418
APHE467
AGLU471
AGLN474

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1571
ChainResidue
AGLY190
AARG191
AHIS192
AHOH2186
AHOH2487

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1572
ChainResidue
AGLN84
AARG88
AHIS154
ATYR155
AGLY541
AHOH2082
AHOH2089

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1573
ChainResidue
ATYR508
ATHR558
ATYR562
AHOH2488
BARG13
BGLY14

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1574
ChainResidue
APHE160
AHOH2159

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1575
ChainResidue
AGLN41
AASP200
ALYS202
AARG206

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1576
ChainResidue
AALA343
AASN347
AASP348
AALA349
AARG352
AHOH2388

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1577
ChainResidue
ALEU340
AHIS341
AGLU344
AARG421
APRO537
AHOH2326
AHOH2384

site_idBC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1578
ChainResidue
APHE204
AHIS205
AARG206
AGLY254
AALA257
AHOH2215
AHOH2259
AHOH2490

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1579
ChainResidue
ATYR363
ATYR367
AGLU427
AHOH2393
AHOH2491

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1580
ChainResidue
ALYS451
APRO452
ATHR453
AHOH2412
ASER443

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PDB entries from 2024-11-13

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