5A11
The crystal structure of Ta-TFP, a thiocyanate-forming protein involved in glucosinolate breakdown (space group P21)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005634 | cellular_component | nucleus |
A | 0005829 | cellular_component | cytosol |
A | 0016829 | molecular_function | lyase activity |
A | 0019760 | biological_process | glucosinolate metabolic process |
A | 0030234 | molecular_function | enzyme regulator activity |
A | 0042802 | molecular_function | identical protein binding |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0080028 | biological_process | nitrile biosynthetic process |
B | 0005634 | cellular_component | nucleus |
B | 0005829 | cellular_component | cytosol |
B | 0016829 | molecular_function | lyase activity |
B | 0019760 | biological_process | glucosinolate metabolic process |
B | 0030234 | molecular_function | enzyme regulator activity |
B | 0042802 | molecular_function | identical protein binding |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0080028 | biological_process | nitrile biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD A 1349 |
Chain | Residue |
A | ARG157 |
site_id | AC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD B 1349 |
Chain | Residue |
B | ARG157 |
site_id | AC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD B 1350 |
Chain | Residue |
B | ARG80 |
site_id | AC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD A 1350 |
Chain | Residue |
A | ARG80 |
site_id | AC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD A 1351 |
Chain | Residue |
A | MET10 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE IOD B 1351 |
Chain | Residue |
B | ARG94 |
B | LYS148 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000269|PubMed:26260516, ECO:0000305|PubMed:23999604, ECO:0000305|PubMed:28479247, ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | ARG94 | |
B | ARG94 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000269|PubMed:26260516, ECO:0000305|PubMed:28479247, ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | ARG157 | |
B | ARG157 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor => ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | GLU220 | |
B | GLU220 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000305|PubMed:23999604 |
Chain | Residue | Details |
A | GLU46 | |
A | VAL310 | |
B | GLU46 | |
B | VAL310 |
site_id | SWS_FT_FI5 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000305|PubMed:23999604, ECO:0000305|PubMed:26260516, ECO:0000305|PubMed:28479247, ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | ARG94 | |
A | GLU266 | |
A | ASP270 | |
A | HIS274 | |
B | ARG94 | |
B | GLU266 | |
B | ASP270 | |
B | HIS274 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000305|PubMed:28479247 |
Chain | Residue | Details |
A | THR129 | |
B | THR129 |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000305|PubMed:23999604, ECO:0000305|PubMed:26260516, ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | PHE130 | |
B | PHE130 |
site_id | SWS_FT_FI8 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000305|PubMed:26260516, ECO:0000305|PubMed:28479247, ECO:0000305|PubMed:30900313 |
Chain | Residue | Details |
A | ARG157 | |
A | TRP309 | |
B | ARG157 | |
B | TRP309 |
site_id | SWS_FT_FI9 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000305|PubMed:23999604, ECO:0000305|PubMed:28479247 |
Chain | Residue | Details |
A | ARG269 | |
B | ARG269 |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | SITE: Essential for catalytic activity => ECO:0000269|PubMed:30900313 |
Chain | Residue | Details |
A | TYR45 | |
B | TYR45 |
site_id | SWS_FT_FI11 |
Number of Residues | 2 |
Details | SITE: Critical for thiocyanate and epithionitrile formation with allylglucosinolate in the presence of myrosinase => ECO:0000269|PubMed:30900313 |
Chain | Residue | Details |
A | THR154 | |
B | THR154 |