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4ZX8

X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 9b

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0006508biological_processproteolysis
A0019538biological_processprotein metabolic process
A0030145molecular_functionmanganese ion binding
A0046872molecular_functionmetal ion binding
A0070006molecular_functionmetalloaminopeptidase activity
B0005737cellular_componentcytoplasm
B0006508biological_processproteolysis
B0019538biological_processprotein metabolic process
B0030145molecular_functionmanganese ion binding
B0046872molecular_functionmetal ion binding
B0070006molecular_functionmetalloaminopeptidase activity
C0005737cellular_componentcytoplasm
C0006508biological_processproteolysis
C0019538biological_processprotein metabolic process
C0030145molecular_functionmanganese ion binding
C0046872molecular_functionmetal ion binding
C0070006molecular_functionmetalloaminopeptidase activity
D0005737cellular_componentcytoplasm
D0006508biological_processproteolysis
D0019538biological_processprotein metabolic process
D0030145molecular_functionmanganese ion binding
D0046872molecular_functionmetal ion binding
D0070006molecular_functionmetalloaminopeptidase activity
E0005737cellular_componentcytoplasm
E0006508biological_processproteolysis
E0019538biological_processprotein metabolic process
E0030145molecular_functionmanganese ion binding
E0046872molecular_functionmetal ion binding
E0070006molecular_functionmetalloaminopeptidase activity
F0005737cellular_componentcytoplasm
F0006508biological_processproteolysis
F0019538biological_processprotein metabolic process
F0030145molecular_functionmanganese ion binding
F0046872molecular_functionmetal ion binding
F0070006molecular_functionmetalloaminopeptidase activity
G0005737cellular_componentcytoplasm
G0006508biological_processproteolysis
G0019538biological_processprotein metabolic process
G0030145molecular_functionmanganese ion binding
G0046872molecular_functionmetal ion binding
G0070006molecular_functionmetalloaminopeptidase activity
H0005737cellular_componentcytoplasm
H0006508biological_processproteolysis
H0019538biological_processprotein metabolic process
H0030145molecular_functionmanganese ion binding
H0046872molecular_functionmetal ion binding
H0070006molecular_functionmetalloaminopeptidase activity
I0005737cellular_componentcytoplasm
I0006508biological_processproteolysis
I0019538biological_processprotein metabolic process
I0030145molecular_functionmanganese ion binding
I0046872molecular_functionmetal ion binding
I0070006molecular_functionmetalloaminopeptidase activity
J0005737cellular_componentcytoplasm
J0006508biological_processproteolysis
J0019538biological_processprotein metabolic process
J0030145molecular_functionmanganese ion binding
J0046872molecular_functionmetal ion binding
J0070006molecular_functionmetalloaminopeptidase activity
K0005737cellular_componentcytoplasm
K0006508biological_processproteolysis
K0019538biological_processprotein metabolic process
K0030145molecular_functionmanganese ion binding
K0046872molecular_functionmetal ion binding
K0070006molecular_functionmetalloaminopeptidase activity
L0005737cellular_componentcytoplasm
L0006508biological_processproteolysis
L0019538biological_processprotein metabolic process
L0030145molecular_functionmanganese ion binding
L0046872molecular_functionmetal ion binding
L0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 4TY A 1001
ChainResidue
ALYS374
AGLY489
AALA577
AZN1002
AZN1003
ACO31004
AASP379
ALYS386
APHE398
AASN457
AASP459
AGLU461
ALEU487
ATHR488

site_idAC2
Number of Residues6
Detailsbinding site for residue ZN A 1002
ChainResidue
ALYS374
AASP379
AASP399
AGLU461
A4TY1001
AZN1003

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 1003
ChainResidue
AASP379
AASP459
AGLU461
A4TY1001
AZN1002

site_idAC4
Number of Residues6
Detailsbinding site for residue CO3 A 1004
ChainResidue
ALYS374
AALA460
AGLY462
AARG463
ALEU487
A4TY1001

site_idAC5
Number of Residues5
Detailsbinding site for residue GOL A 1005
ChainResidue
AGLU125
AGLY126
ASER220
GLYS111
GHIS266

site_idAC6
Number of Residues1
Detailsbinding site for residue GOL A 1006
ChainResidue
APHE583

site_idAC7
Number of Residues3
Detailsbinding site for residue DMS A 1007
ChainResidue
AGLY390
ASER391
AMET392

site_idAC8
Number of Residues3
Detailsbinding site for residue 1PE A 1008
ChainResidue
ATYR103
ALYS320
ASO41012

site_idAC9
Number of Residues3
Detailsbinding site for residue 1PE A 1009
ChainResidue
ATYR103
AASN104
ATYR411

site_idAD1
Number of Residues9
Detailsbinding site for residue 1PE A 1010
ChainResidue
ATYR115
AASN122
AGLU124
ATYR270
A1PE1011
GTYR115
GASN122
GGLU124
GTYR270

site_idAD2
Number of Residues3
Detailsbinding site for residue 1PE A 1011
ChainResidue
AASN122
A1PE1010
GASN122

site_idAD3
Number of Residues4
Detailsbinding site for residue SO4 A 1012
ChainResidue
AGLU102
ATYR103
AASN104
A1PE1008

site_idAD4
Number of Residues13
Detailsbinding site for residue 4TY B 1001
ChainResidue
BLYS374
BASP379
BLYS386
BASN457
BASP459
BGLU461
BLEU487
BGLY489
BZN1002
BZN1003
BCO31004
BHOH1162
BHOH1166

site_idAD5
Number of Residues7
Detailsbinding site for residue ZN B 1002
ChainResidue
BLYS374
BASP379
BASP399
BGLU461
B4TY1001
BZN1003
BHOH1162

site_idAD6
Number of Residues5
Detailsbinding site for residue ZN B 1003
ChainResidue
BASP379
BASP459
BGLU461
B4TY1001
BZN1002

site_idAD7
Number of Residues6
Detailsbinding site for residue CO3 B 1004
ChainResidue
BLYS374
BALA460
BGLY462
BARG463
BLEU487
B4TY1001

site_idAD8
Number of Residues3
Detailsbinding site for residue 1PE B 1005
ChainResidue
BTYR103
BGLU316
BLYS320

site_idAD9
Number of Residues6
Detailsbinding site for residue SO4 B 1006
ChainResidue
BLYS436
CSER435
CLYS436
ASER435
ALYS436
BSER435

site_idAE1
Number of Residues13
Detailsbinding site for residue 4TY C 1001
ChainResidue
CLYS374
CASP379
CLYS386
CASN457
CASP459
CGLU461
CLEU487
CTHR488
CGLY489
CZN1002
CZN1003
CCO31004
CHOH1162

site_idAE2
Number of Residues5
Detailsbinding site for residue ZN C 1002
ChainResidue
CASP379
CASP459
CGLU461
C4TY1001
CZN1003

site_idAE3
Number of Residues6
Detailsbinding site for residue ZN C 1003
ChainResidue
CLYS374
CASP379
CASP399
CGLU461
C4TY1001
CZN1002

site_idAE4
Number of Residues6
Detailsbinding site for residue CO3 C 1004
ChainResidue
CLYS374
CALA460
CGLY462
CARG463
CLEU487
C4TY1001

site_idAE5
Number of Residues3
Detailsbinding site for residue GOL C 1005
ChainResidue
CASN134
CLYS137
CPRO141

site_idAE6
Number of Residues3
Detailsbinding site for residue 1PE C 1006
ChainResidue
CTYR103
CGLU316
CLYS320

site_idAE7
Number of Residues4
Detailsbinding site for residue 1PE C 1007
ChainResidue
CTYR103
CHIS108
CPHE289
CTYR411

site_idAE8
Number of Residues15
Detailsbinding site for residue 4TY D 1001
ChainResidue
DLYS374
DASP379
DLYS386
DMET392
DPHE398
DASN457
DASP459
DGLU461
DLEU487
DTHR488
DGLY489
DZN1002
DZN1003
DCO31004
DHOH1131

site_idAE9
Number of Residues5
Detailsbinding site for residue ZN D 1002
ChainResidue
DASP379
DASP459
DGLU461
D4TY1001
DZN1003

site_idAF1
Number of Residues6
Detailsbinding site for residue ZN D 1003
ChainResidue
DLYS374
DASP379
DASP399
DGLU461
D4TY1001
DZN1002

site_idAF2
Number of Residues6
Detailsbinding site for residue CO3 D 1004
ChainResidue
DLYS374
DALA460
DGLY462
DARG463
DLEU487
D4TY1001

site_idAF3
Number of Residues3
Detailsbinding site for residue 1PE D 1005
ChainResidue
DTYR103
DGLU316
DLYS320

site_idAF4
Number of Residues4
Detailsbinding site for residue 1PE D 1006
ChainResidue
DTYR103
DASN104
DPHE289
DTYR411

site_idAF5
Number of Residues4
Detailsbinding site for residue SO4 D 1007
ChainResidue
APHE156
DTYR176
DPHE178
DSER184

site_idAF6
Number of Residues12
Detailsbinding site for residue 4TY E 1001
ChainResidue
ELYS374
EASP379
ELYS386
EPHE398
EASP459
EGLU461
ELEU487
EGLY489
ESER554
EZN1002
EZN1003
ECO31004

site_idAF7
Number of Residues6
Detailsbinding site for residue ZN E 1002
ChainResidue
ELYS374
EASP379
EASP399
EGLU461
E4TY1001
EZN1003

site_idAF8
Number of Residues5
Detailsbinding site for residue ZN E 1003
ChainResidue
EASP379
EASP459
EGLU461
E4TY1001
EZN1002

site_idAF9
Number of Residues6
Detailsbinding site for residue CO3 E 1004
ChainResidue
ELYS374
EALA460
EGLY462
EARG463
ELEU487
E4TY1001

site_idAG1
Number of Residues4
Detailsbinding site for residue GOL E 1005
ChainResidue
EGLU125
EGLY126
ESER220
GALA85

site_idAG2
Number of Residues3
Detailsbinding site for residue 1PE E 1006
ChainResidue
EGLU316
ELYS320
ESO41009

site_idAG3
Number of Residues3
Detailsbinding site for residue 1PE E 1007
ChainResidue
ETYR103
EHIS108
ETYR411

site_idAG4
Number of Residues6
Detailsbinding site for residue SO4 E 1008
ChainResidue
CPHE156
CASN161
CLYS164
EMET177
EPHE178
ESER184

site_idAG5
Number of Residues4
Detailsbinding site for residue SO4 E 1009
ChainResidue
EILE101
ETYR103
EASN104
E1PE1006

site_idAG6
Number of Residues13
Detailsbinding site for residue 4TY F 1001
ChainResidue
FLYS374
FASP379
FLYS386
FASP459
FGLU461
FLEU487
FTHR488
FGLY489
FZN1002
FZN1003
FCO31004
FHOH1141
FHOH1161

site_idAG7
Number of Residues7
Detailsbinding site for residue ZN F 1002
ChainResidue
FLYS374
FASP379
FASP399
FGLU461
F4TY1001
FZN1003
FHOH1161

site_idAG8
Number of Residues5
Detailsbinding site for residue ZN F 1003
ChainResidue
FASP379
FASP459
FGLU461
F4TY1001
FZN1002

site_idAG9
Number of Residues6
Detailsbinding site for residue CO3 F 1004
ChainResidue
FLYS374
FALA460
FGLY462
FARG463
FLEU487
F4TY1001

site_idAH1
Number of Residues4
Detailsbinding site for residue GOL F 1005
ChainResidue
FGLY329
FVAL330
FLYS331
FGLU332

site_idAH2
Number of Residues4
Detailsbinding site for residue 1PE F 1006
ChainResidue
DSER254
FLYS451
FASP543
FGLN567

site_idAH3
Number of Residues5
Detailsbinding site for residue 1PE F 1007
ChainResidue
ATYR499
FILE529
FILE530
FASN531
FGLU532

site_idAH4
Number of Residues5
Detailsbinding site for residue 1PE F 1008
ChainResidue
FTYR103
FASN104
FLYS320
FTYR411
FHOH1124

site_idAH5
Number of Residues6
Detailsbinding site for residue 1PE F 1009
ChainResidue
FTYR103
FASN104
FGLU316
FLYS320
FSO41011
JASN181

site_idAH6
Number of Residues6
Detailsbinding site for residue SO4 F 1010
ChainResidue
DSER435
DLYS436
ESER435
ELYS436
FSER435
FLYS436

site_idAH7
Number of Residues4
Detailsbinding site for residue SO4 F 1011
ChainResidue
FGLU102
FTYR103
FASN104
F1PE1009

site_idAH8
Number of Residues15
Detailsbinding site for residue 4TY G 1001
ChainResidue
GLYS374
GASP379
GLYS386
GPHE398
GASN457
GASP459
GGLU461
GLEU487
GTHR488
GGLY489
GSER554
GZN1002
GZN1003
GCO31004
GHOH1159

site_idAH9
Number of Residues6
Detailsbinding site for residue ZN G 1002
ChainResidue
GLYS374
GASP379
GASP399
GGLU461
G4TY1001
GZN1003

site_idAI1
Number of Residues5
Detailsbinding site for residue ZN G 1003
ChainResidue
GASP379
GASP459
GGLU461
G4TY1001
GZN1002

site_idAI2
Number of Residues6
Detailsbinding site for residue CO3 G 1004
ChainResidue
GLYS374
GALA460
GGLY462
GARG463
GLEU487
G4TY1001

site_idAI3
Number of Residues4
Detailsbinding site for residue 1PE G 1005
ChainResidue
GTYR103
GHIS108
GLYS320
GTYR411

site_idAI4
Number of Residues3
Detailsbinding site for residue 1PE G 1006
ChainResidue
GASN104
GGLU316
GLYS320

site_idAI5
Number of Residues14
Detailsbinding site for residue 4TY H 1001
ChainResidue
HLYS374
HASP379
HLYS386
HPHE398
HASN457
HASP459
HGLU461
HLEU487
HGLY489
HZN1002
HZN1003
HCO31004
HHOH1146
HHOH1178

site_idAI6
Number of Residues7
Detailsbinding site for residue ZN H 1002
ChainResidue
HLYS374
HASP379
HASP399
HGLU461
H4TY1001
HZN1003
HHOH1146

site_idAI7
Number of Residues5
Detailsbinding site for residue ZN H 1003
ChainResidue
HASP379
HASP459
HGLU461
H4TY1001
HZN1002

site_idAI8
Number of Residues6
Detailsbinding site for residue CO3 H 1004
ChainResidue
HLYS374
HALA460
HGLY462
HARG463
HLEU487
H4TY1001

site_idAI9
Number of Residues2
Detailsbinding site for residue 1PE H 1005
ChainResidue
HTYR103
HTYR411

site_idAJ1
Number of Residues3
Detailsbinding site for residue 1PE H 1006
ChainResidue
HTYR103
HGLU316
HLYS320

site_idAJ2
Number of Residues6
Detailsbinding site for residue SO4 H 1007
ChainResidue
GSER435
GLYS436
HSER435
HLYS436
ISER435
ILYS436

site_idAJ3
Number of Residues15
Detailsbinding site for residue 4TY I 1001
ChainResidue
ILYS374
IASP379
ILYS386
IPHE398
IASN457
IASP459
IGLU461
ITHR486
ILEU487
ITHR488
IGLY489
IZN1002
IZN1003
ICO31004
IHOH1190

site_idAJ4
Number of Residues5
Detailsbinding site for residue ZN I 1002
ChainResidue
IASP379
IASP459
IGLU461
I4TY1001
IZN1003

site_idAJ5
Number of Residues6
Detailsbinding site for residue ZN I 1003
ChainResidue
ILYS374
IASP379
IASP399
IGLU461
I4TY1001
IZN1002

site_idAJ6
Number of Residues6
Detailsbinding site for residue CO3 I 1004
ChainResidue
ILYS374
IALA460
IGLY462
IARG463
ILEU487
I4TY1001

site_idAJ7
Number of Residues5
Detailsbinding site for residue GOL I 1005
ChainResidue
IILE529
IASN531
IGLU532
JSER199
JTYR499

site_idAJ8
Number of Residues3
Detailsbinding site for residue 1PE I 1006
ChainResidue
ITYR103
IGLU316
ILYS320

site_idAJ9
Number of Residues3
Detailsbinding site for residue 1PE I 1007
ChainResidue
IASN104
IHIS108
ITYR411

site_idAK1
Number of Residues15
Detailsbinding site for residue 4TY J 1001
ChainResidue
JLYS374
JASP379
JLYS386
JPHE398
JASN457
JASP459
JGLU461
JLEU487
JTHR488
JGLY489
JALA577
JZN1002
JZN1003
JCO31004
JHOH1108

site_idAK2
Number of Residues5
Detailsbinding site for residue ZN J 1002
ChainResidue
JASP379
JASP459
JGLU461
J4TY1001
JZN1003

site_idAK3
Number of Residues6
Detailsbinding site for residue ZN J 1003
ChainResidue
JLYS374
JASP379
JASP399
JGLU461
J4TY1001
JZN1002

site_idAK4
Number of Residues6
Detailsbinding site for residue CO3 J 1004
ChainResidue
JLYS374
JALA460
JGLY462
JARG463
JLEU487
J4TY1001

site_idAK5
Number of Residues4
Detailsbinding site for residue 1PE J 1005
ChainResidue
JGLU316
JGLN319
JLYS320
JSO41008

site_idAK6
Number of Residues5
Detailsbinding site for residue 1PE J 1006
ChainResidue
JTYR103
JHIS108
JPHE289
JLYS320
JTYR411

site_idAK7
Number of Residues6
Detailsbinding site for residue SO4 J 1007
ChainResidue
GPHE156
GASN161
JTYR176
JMET177
JPHE178
JSER184

site_idAK8
Number of Residues4
Detailsbinding site for residue SO4 J 1008
ChainResidue
JILE101
JTYR103
JASN104
J1PE1005

site_idAK9
Number of Residues3
Detailsbinding site for residue SO4 J 1009
ChainResidue
JGLY390
JSER391
JMET392

site_idAL1
Number of Residues13
Detailsbinding site for residue 4TY K 1001
ChainResidue
KLYS374
KASP379
KLYS386
KASN457
KASP459
KGLU461
KARG463
KLEU487
KGLY489
KZN1002
KZN1003
KCO31004
KHOH1145

site_idAL2
Number of Residues5
Detailsbinding site for residue ZN K 1002
ChainResidue
KASP379
KASP459
KGLU461
K4TY1001
KZN1003

site_idAL3
Number of Residues6
Detailsbinding site for residue ZN K 1003
ChainResidue
KLYS374
KASP379
KASP399
KGLU461
K4TY1001
KZN1002

site_idAL4
Number of Residues6
Detailsbinding site for residue CO3 K 1004
ChainResidue
KLYS374
KALA460
KGLY462
KARG463
KLEU487
K4TY1001

site_idAL5
Number of Residues4
Detailsbinding site for residue 1PE K 1005
ChainResidue
KTYR103
KGLU316
KLYS320
KSO41008

site_idAL6
Number of Residues4
Detailsbinding site for residue 1PE K 1006
ChainResidue
KTYR103
KHIS108
KLYS320
KTYR411

site_idAL7
Number of Residues6
Detailsbinding site for residue SO4 K 1007
ChainResidue
JSER435
JLYS436
KSER435
KLYS436
LSER435
LLYS436

site_idAL8
Number of Residues3
Detailsbinding site for residue SO4 K 1008
ChainResidue
KTYR103
KASN104
K1PE1005

site_idAL9
Number of Residues14
Detailsbinding site for residue 4TY L 1001
ChainResidue
LLYS374
LASP379
LLYS386
LPHE398
LASN457
LASP459
LGLU461
LLEU487
LGLY489
LZN1002
LZN1003
LCO31004
LHOH1155
LHOH1162

site_idAM1
Number of Residues7
Detailsbinding site for residue ZN L 1002
ChainResidue
LLYS374
LASP379
LASP399
LGLU461
L4TY1001
LZN1003
LHOH1162

site_idAM2
Number of Residues5
Detailsbinding site for residue ZN L 1003
ChainResidue
LASP379
LASP459
LGLU461
L4TY1001
LZN1002

site_idAM3
Number of Residues6
Detailsbinding site for residue CO3 L 1004
ChainResidue
LLYS374
LALA460
LGLY462
LARG463
LLEU487
L4TY1001

site_idAM4
Number of Residues4
Detailsbinding site for residue 1PE L 1005
ChainResidue
LTYR103
LASN104
LHIS108
LTYR411

Functional Information from PROSITE/UniProt
site_idPS00631
Number of Residues8
DetailsCYTOSOL_AP Cytosol aminopeptidase signature. NTDAEGRL
ChainResidueDetails
AASN457-LEU464

222415

PDB entries from 2024-07-10

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