4ZSW
Pig Brain GABA-AT inactivated by (E)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic acid
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003867 | molecular_function | 4-aminobutyrate transaminase activity |
A | 0005739 | cellular_component | mitochondrion |
A | 0005759 | cellular_component | mitochondrial matrix |
A | 0005829 | cellular_component | cytosol |
A | 0008483 | molecular_function | transaminase activity |
A | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
A | 0009450 | biological_process | gamma-aminobutyric acid catabolic process |
A | 0016740 | molecular_function | transferase activity |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0032144 | cellular_component | 4-aminobutyrate transaminase complex |
A | 0032145 | molecular_function | succinate-semialdehyde dehydrogenase binding |
A | 0034386 | molecular_function | 4-aminobutyrate:2-oxoglutarate transaminase activity |
A | 0042802 | molecular_function | identical protein binding |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0047298 | molecular_function | (S)-3-amino-2-methylpropionate transaminase activity |
A | 0048148 | biological_process | behavioral response to cocaine |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
B | 0003867 | molecular_function | 4-aminobutyrate transaminase activity |
B | 0005739 | cellular_component | mitochondrion |
B | 0005759 | cellular_component | mitochondrial matrix |
B | 0005829 | cellular_component | cytosol |
B | 0008483 | molecular_function | transaminase activity |
B | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
B | 0009450 | biological_process | gamma-aminobutyric acid catabolic process |
B | 0016740 | molecular_function | transferase activity |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0032144 | cellular_component | 4-aminobutyrate transaminase complex |
B | 0032145 | molecular_function | succinate-semialdehyde dehydrogenase binding |
B | 0034386 | molecular_function | 4-aminobutyrate:2-oxoglutarate transaminase activity |
B | 0042802 | molecular_function | identical protein binding |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0047298 | molecular_function | (S)-3-amino-2-methylpropionate transaminase activity |
B | 0048148 | biological_process | behavioral response to cocaine |
B | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
C | 0003867 | molecular_function | 4-aminobutyrate transaminase activity |
C | 0005739 | cellular_component | mitochondrion |
C | 0005759 | cellular_component | mitochondrial matrix |
C | 0005829 | cellular_component | cytosol |
C | 0008483 | molecular_function | transaminase activity |
C | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
C | 0009450 | biological_process | gamma-aminobutyric acid catabolic process |
C | 0016740 | molecular_function | transferase activity |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0032144 | cellular_component | 4-aminobutyrate transaminase complex |
C | 0032145 | molecular_function | succinate-semialdehyde dehydrogenase binding |
C | 0034386 | molecular_function | 4-aminobutyrate:2-oxoglutarate transaminase activity |
C | 0042802 | molecular_function | identical protein binding |
C | 0042803 | molecular_function | protein homodimerization activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0047298 | molecular_function | (S)-3-amino-2-methylpropionate transaminase activity |
C | 0048148 | biological_process | behavioral response to cocaine |
C | 0051536 | molecular_function | iron-sulfur cluster binding |
C | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
D | 0003867 | molecular_function | 4-aminobutyrate transaminase activity |
D | 0005739 | cellular_component | mitochondrion |
D | 0005759 | cellular_component | mitochondrial matrix |
D | 0005829 | cellular_component | cytosol |
D | 0008483 | molecular_function | transaminase activity |
D | 0009448 | biological_process | gamma-aminobutyric acid metabolic process |
D | 0009450 | biological_process | gamma-aminobutyric acid catabolic process |
D | 0016740 | molecular_function | transferase activity |
D | 0030170 | molecular_function | pyridoxal phosphate binding |
D | 0032144 | cellular_component | 4-aminobutyrate transaminase complex |
D | 0032145 | molecular_function | succinate-semialdehyde dehydrogenase binding |
D | 0034386 | molecular_function | 4-aminobutyrate:2-oxoglutarate transaminase activity |
D | 0042802 | molecular_function | identical protein binding |
D | 0042803 | molecular_function | protein homodimerization activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0047298 | molecular_function | (S)-3-amino-2-methylpropionate transaminase activity |
D | 0048148 | biological_process | behavioral response to cocaine |
D | 0051536 | molecular_function | iron-sulfur cluster binding |
D | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue FES A 501 |
Chain | Residue |
A | ALA134 |
A | CYS135 |
A | CYS138 |
B | ALA134 |
B | CYS135 |
B | CYS138 |
site_id | AC2 |
Number of Residues | 21 |
Details | binding site for residue RW2 A 502 |
Chain | Residue |
A | ASN140 |
A | PHE189 |
A | HIS190 |
A | ARG192 |
A | GLU265 |
A | GLU270 |
A | ASP298 |
A | VAL300 |
A | GLN301 |
A | LYS329 |
A | ARG445 |
A | HOH619 |
A | HOH695 |
A | HOH701 |
A | HOH800 |
B | PHE351 |
B | ASN352 |
B | THR353 |
A | CYS135 |
A | GLY136 |
A | SER137 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue GOL B 501 |
Chain | Residue |
B | LYS125 |
B | HIS313 |
B | GLU314 |
B | TRP316 |
B | GLY317 |
B | LEU318 |
B | PRO321 |
B | HOH613 |
site_id | AC4 |
Number of Residues | 20 |
Details | binding site for residue RW2 B 502 |
Chain | Residue |
A | PHE351 |
A | ASN352 |
A | THR353 |
B | CYS135 |
B | GLY136 |
B | SER137 |
B | PHE189 |
B | HIS190 |
B | ARG192 |
B | GLU265 |
B | GLU270 |
B | ASP298 |
B | VAL300 |
B | GLN301 |
B | LYS329 |
B | ARG445 |
B | HOH610 |
B | HOH625 |
B | HOH649 |
B | HOH826 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue FES C 501 |
Chain | Residue |
C | ALA134 |
C | CYS135 |
C | CYS138 |
D | CYS135 |
D | CYS138 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue GOL C 502 |
Chain | Residue |
C | ASP278 |
C | ARG282 |
C | HIS315 |
C | HOH699 |
C | HOH790 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue ACT C 503 |
Chain | Residue |
C | LYS203 |
C | HIS206 |
C | HOH603 |
C | HOH663 |
D | TYR348 |
site_id | AC8 |
Number of Residues | 21 |
Details | binding site for residue RW2 C 504 |
Chain | Residue |
C | CYS135 |
C | GLY136 |
C | SER137 |
C | PHE189 |
C | HIS190 |
C | ARG192 |
C | GLU265 |
C | GLU270 |
C | ASP298 |
C | VAL300 |
C | GLN301 |
C | LYS329 |
C | ARG445 |
C | HOH620 |
C | HOH621 |
C | HOH663 |
C | HOH782 |
C | HOH850 |
D | PHE351 |
D | ASN352 |
D | THR353 |
site_id | AC9 |
Number of Residues | 21 |
Details | binding site for residue RW2 D 501 |
Chain | Residue |
D | HIS190 |
D | ARG192 |
D | GLU265 |
D | GLU270 |
D | ASP298 |
D | VAL300 |
D | GLN301 |
D | LYS329 |
D | ARG445 |
D | HOH616 |
D | HOH637 |
D | HOH874 |
D | HOH883 |
C | PHE351 |
C | ASN352 |
C | THR353 |
D | ILE72 |
D | CYS135 |
D | GLY136 |
D | SER137 |
D | PHE189 |
Functional Information from PROSITE/UniProt
site_id | PS00600 |
Number of Residues | 40 |
Details | AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. FLvDEVqtgGG.StGkfwahehwglddpa..DVMtfSKkmmTG |
Chain | Residue | Details |
A | PHE295-GLY334 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14534310 |
Chain | Residue | Details |
A | CYS135 | |
A | CYS138 | |
B | CYS135 | |
B | CYS138 | |
C | CYS135 | |
C | CYS138 | |
D | CYS135 | |
D | CYS138 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: in other chain => ECO:0000269|PubMed:10393538 |
Chain | Residue | Details |
A | GLY136 | |
B | GLY136 | |
C | GLY136 | |
D | GLY136 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14534310, ECO:0000305|PubMed:10393538 |
Chain | Residue | Details |
A | ARG192 | |
B | ARG192 | |
C | ARG192 | |
D | ARG192 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:10393538, ECO:0000269|PubMed:14534310 |
Chain | Residue | Details |
A | THR353 | |
B | THR353 | |
C | THR353 | |
D | THR353 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P61922 |
Chain | Residue | Details |
A | LYS203 | |
B | LYS203 | |
C | LYS203 | |
D | LYS203 |
site_id | SWS_FT_FI6 |
Number of Residues | 8 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P61922 |
Chain | Residue | Details |
A | LYS224 | |
A | LYS385 | |
B | LYS224 | |
B | LYS385 | |
C | LYS224 | |
C | LYS385 | |
D | LYS224 | |
D | LYS385 |
site_id | SWS_FT_FI7 |
Number of Residues | 16 |
Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P61922 |
Chain | Residue | Details |
A | LYS251 | |
C | LYS290 | |
C | LYS424 | |
C | LYS442 | |
D | LYS251 | |
D | LYS290 | |
D | LYS424 | |
D | LYS442 | |
A | LYS290 | |
A | LYS424 | |
A | LYS442 | |
B | LYS251 | |
B | LYS290 | |
B | LYS424 | |
B | LYS442 | |
C | LYS251 |
site_id | SWS_FT_FI8 |
Number of Residues | 4 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:10393538 |
Chain | Residue | Details |
A | LYS329 | |
B | LYS329 | |
C | LYS329 | |
D | LYS329 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 854 |
Chain | Residue | Details |
A | PHE189 | steric role |
A | ASP298 | electrostatic stabiliser |
A | LYS329 | covalent catalysis, proton shuttle (general acid/base) |
A | THR353 | electrostatic stabiliser |
site_id | MCSA2 |
Number of Residues | 4 |
Details | M-CSA 854 |
Chain | Residue | Details |
B | PHE189 | steric role |
B | ASP298 | electrostatic stabiliser |
B | LYS329 | covalent catalysis, proton shuttle (general acid/base) |
B | THR353 | electrostatic stabiliser |
site_id | MCSA3 |
Number of Residues | 4 |
Details | M-CSA 854 |
Chain | Residue | Details |
C | PHE189 | steric role |
C | ASP298 | electrostatic stabiliser |
C | LYS329 | covalent catalysis, proton shuttle (general acid/base) |
C | THR353 | electrostatic stabiliser |
site_id | MCSA4 |
Number of Residues | 4 |
Details | M-CSA 854 |
Chain | Residue | Details |
D | PHE189 | steric role |
D | ASP298 | electrostatic stabiliser |
D | LYS329 | covalent catalysis, proton shuttle (general acid/base) |
D | THR353 | electrostatic stabiliser |