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4ZQL

Crystal structure of TRIM24 with 3,4-dimethoxy-N-(6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-5-yl)benzenesulfonamide inhibitor

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1101
ChainResidue
ACYS829
ACYS832
AHIS849
ACYS852

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1102
ChainResidue
ACYS841
ACYS844
ACYS867
ACYS870

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 1103
ChainResidue
AARG906
AHOH1242
APRO902

site_idAC4
Number of Residues3
Detailsbinding site for residue DMS A 1104
ChainResidue
AALA923
AASN980
AHOH1217

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 1101
ChainResidue
BCYS829
BCYS832
BHIS849
BCYS852

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN B 1102
ChainResidue
BCYS841
BCYS844
BCYS867
BCYS870

site_idAC7
Number of Residues11
Detailsbinding site for residue 4QH B 1103
ChainResidue
ALEU930
ATYR936
BLEU922
BALA923
BPHE924
BVAL928
BVAL932
BPHE979
BASN980
BHOH1212
BHOH1268

site_idAC8
Number of Residues2
Detailsbinding site for residue SO4 B 1104
ChainResidue
BPRO902
BARG906

site_idAC9
Number of Residues6
Detailsbinding site for residue 1PE B 1105
ChainResidue
BLYS846
BGLU895
BGLY896
BPHE914
BTYR956
BHOH1238

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues62
DetailsBROMODOMAIN_1 Bromodomain signature. HemSlafqDpvpltvpDYYkiIknpMdlstIkkrlqedysmYskpedfvadfrl.IfqNCaeF
ChainResidueDetails
AHIS918-PHE979

site_idPS01359
Number of Residues42
DetailsZF_PHD_1 Zinc finger PHD-type signature. CavCqnggel.......................................LcCek..Cpkv.FHlsChvptltnfpsge.................................WiCtfC
ChainResidueDetails
ACYS829-CYS870

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues94
DetailsZN_FING: PHD-type => ECO:0000255|PROSITE-ProRule:PRU00146
ChainResidueDetails
APHE860-LYS907
BPHE860-LYS907

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Interaction with histone H3 that is not methylated at 'Lys-4' (H3K4me0)
ChainResidueDetails
APRO861
BPRO861

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
AGLU842
BGLU842

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
APRO845
BPRO845

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:21406692
ChainResidueDetails
ACYS852
BCYS852

site_idSWS_FT_FI6
Number of Residues6
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
AGLY835
ACYS844
AGLU909
BGLY835
BCYS844
BGLU909

site_idSWS_FT_FI7
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447
ChainResidueDetails
AASP983
BASP983

227344

PDB entries from 2024-11-13

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