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4ZK8

Copper-containing nitrite reductase from thermophilic bacterium Geobacillus thermodenitrificans (Re-refined)

Replaces:  3WKO
Functional Information from GO Data
ChainGOidnamespacecontents
A0004322molecular_functionferroxidase activity
A0005507molecular_functioncopper ion binding
A0006807biological_processobsolete nitrogen compound metabolic process
A0016491molecular_functionoxidoreductase activity
A0030288cellular_componentouter membrane-bounded periplasmic space
A0046872molecular_functionmetal ion binding
A0050421molecular_functionnitrite reductase (NO-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CU A 401
ChainResidue
AHIS95
ACYS135
AHIS143
AMET148

site_idAC2
Number of Residues5
Detailsbinding site for residue CU A 402
ChainResidue
AHIS100
AHIS134
AHIS294
ACL419
AHOH507

site_idAC3
Number of Residues5
Detailsbinding site for residue CU A 403
ChainResidue
AHIS42
AGLU53
AHIS83
AHOH567
AHOH750

site_idAC4
Number of Residues4
Detailsbinding site for residue CU A 404
ChainResidue
AGLU226
AHOH646
AHOH720
AHOH760

site_idAC5
Number of Residues5
Detailsbinding site for residue CU A 405
ChainResidue
AGLU169
AMPD421
AACY427
AHOH520
AHOH732

site_idAC6
Number of Residues6
Detailsbinding site for residue CU A 406
ChainResidue
AASP40
AGLU217
ACU417
AHOH515
AHOH637
AHOH757

site_idAC7
Number of Residues4
Detailsbinding site for residue CU A 407
ChainResidue
AASP251
ACU408
AHOH508
AHOH516

site_idAC8
Number of Residues5
Detailsbinding site for residue CU A 408
ChainResidue
AASP251
ACU407
AHOH508
AHOH516
AHOH535

site_idAC9
Number of Residues6
Detailsbinding site for residue CU A 409
ChainResidue
AASP55
AHOH510
AHOH523
AHOH526
AHOH673
AHOH786

site_idAD1
Number of Residues3
Detailsbinding site for residue CU A 410
ChainResidue
AHIS39
AHOH719
AHOH769

site_idAD2
Number of Residues7
Detailsbinding site for residue CU A 411
ChainResidue
AGLU165
AASP167
AHOH511
AHOH541
AHOH627
AHOH653
AHOH801

site_idAD3
Number of Residues3
Detailsbinding site for residue CU A 412
ChainResidue
ALYS127
AASP251
ATHR282

site_idAD4
Number of Residues10
Detailsbinding site for residue CU A 413
ChainResidue
APRO191
AGLU239
AASN297
AHIS298
ACU418
AHOH501
AHOH549
AHOH663
AHOH739
AHOH815

site_idAD5
Number of Residues4
Detailsbinding site for residue CU A 414
ChainResidue
AASP182
AHOH662
AHOH701
AHOH770

site_idAD6
Number of Residues2
Detailsbinding site for residue CU A 415
ChainResidue
AHIS262
AHOH797

site_idAD7
Number of Residues5
Detailsbinding site for residue CU A 416
ChainResidue
AGLU78
AHOH504
AHOH583
AHOH736
AHOH746

site_idAD8
Number of Residues5
Detailsbinding site for residue CU A 417
ChainResidue
AGLU217
ACU406
AHOH515
AHOH637
AHOH757

site_idAD9
Number of Residues9
Detailsbinding site for residue CU A 418
ChainResidue
AGLU239
ACU413
AHOH501
AHOH549
AHOH560
AHOH658
AHOH739
AHOH815
AHOH853

site_idAE1
Number of Residues7
Detailsbinding site for residue CL A 419
ChainResidue
AHIS134
AHIS244
AVAL246
AHIS294
ACU402
AHOH507
AHOH802

site_idAE2
Number of Residues1
Detailsbinding site for residue CL A 420
ChainResidue
ALYS157

site_idAE3
Number of Residues6
Detailsbinding site for residue MPD A 421
ChainResidue
AASP167
AARG168
AGLU169
ACU405
AHOH520
AHOH528

site_idAE4
Number of Residues5
Detailsbinding site for residue MPD A 422
ChainResidue
AARG285
AHOH566
AHOH585
AHOH846
AHOH875

site_idAE5
Number of Residues6
Detailsbinding site for residue MPD A 423
ChainResidue
ALYS22
AGLY23
AASP51
ALYS61
AHOH665
AHOH731

site_idAE6
Number of Residues7
Detailsbinding site for residue PEG A 424
ChainResidue
ALYS32
AMET33
AGLU34
AHIS42
AGLU44
AHOH578
AHOH796

site_idAE7
Number of Residues4
Detailsbinding site for residue EDO A 425
ChainResidue
ALYS216
APRO219
AMET306
AHOH867

site_idAE8
Number of Residues2
Detailsbinding site for residue SO4 A 426
ChainResidue
AHIS262
ALEU263

site_idAE9
Number of Residues6
Detailsbinding site for residue ACY A 427
ChainResidue
AGLU169
ALEU201
ATYR231
ACU405
AHOH520
AHOH732

site_idAF1
Number of Residues1
Detailsbinding site for residue ACY A 428
ChainResidue
AARG168

site_idAF2
Number of Residues5
Detailsbinding site for residue TRS A 429
ChainResidue
ASER107
AGLY287
ATHR288
ALYS308
AHOH527

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PDB entries from 2024-06-12

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