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4Z1U

MIF in complex with 1-(4-methylphenyl)-3-phenylprop-2-yn-1-one

Functional Information from GO Data
ChainGOidnamespacecontents
A0001516biological_processprostaglandin biosynthetic process
A0001819biological_processpositive regulation of cytokine production
A0001934biological_processpositive regulation of protein phosphorylation
A0002020molecular_functionprotease binding
A0002906biological_processnegative regulation of mature B cell apoptotic process
A0004167molecular_functiondopachrome isomerase activity
A0005125molecular_functioncytokine activity
A0005126molecular_functioncytokine receptor binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006954biological_processinflammatory response
A0007166biological_processcell surface receptor signaling pathway
A0008284biological_processpositive regulation of cell population proliferation
A0009986cellular_componentcell surface
A0010629biological_processnegative regulation of gene expression
A0010739biological_processpositive regulation of protein kinase A signaling
A0010760biological_processnegative regulation of macrophage chemotaxis
A0016853molecular_functionisomerase activity
A0019752biological_processcarboxylic acid metabolic process
A0030330biological_processDNA damage response, signal transduction by p53 class mediator
A0030336biological_processnegative regulation of cell migration
A0030890biological_processpositive regulation of B cell proliferation
A0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
A0031982cellular_componentvesicle
A0032760biological_processpositive regulation of tumor necrosis factor production
A0033033biological_processnegative regulation of myeloid cell apoptotic process
A0033138biological_processpositive regulation of peptidyl-serine phosphorylation
A0034774cellular_componentsecretory granule lumen
A0042056molecular_functionchemoattractant activity
A0042127biological_processregulation of cell population proliferation
A0042327biological_processpositive regulation of phosphorylation
A0042802molecular_functionidentical protein binding
A0043030biological_processregulation of macrophage activation
A0043066biological_processnegative regulation of apoptotic process
A0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
A0045087biological_processinnate immune response
A0048146biological_processpositive regulation of fibroblast proliferation
A0050178molecular_functionphenylpyruvate tautomerase activity
A0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
A0050918biological_processpositive chemotaxis
A0051248biological_processnegative regulation of protein metabolic process
A0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
A0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
A0070062cellular_componentextracellular exosome
A0070207biological_processprotein homotrimerization
A0070374biological_processpositive regulation of ERK1 and ERK2 cascade
A0090238biological_processpositive regulation of arachidonic acid secretion
A0090398biological_processcellular senescence
A1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
A1904813cellular_componentficolin-1-rich granule lumen
A2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
A2000773biological_processnegative regulation of cellular senescence
B0001516biological_processprostaglandin biosynthetic process
B0001819biological_processpositive regulation of cytokine production
B0001934biological_processpositive regulation of protein phosphorylation
B0002020molecular_functionprotease binding
B0002906biological_processnegative regulation of mature B cell apoptotic process
B0004167molecular_functiondopachrome isomerase activity
B0005125molecular_functioncytokine activity
B0005126molecular_functioncytokine receptor binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006954biological_processinflammatory response
B0007166biological_processcell surface receptor signaling pathway
B0008284biological_processpositive regulation of cell population proliferation
B0009986cellular_componentcell surface
B0010629biological_processnegative regulation of gene expression
B0010739biological_processpositive regulation of protein kinase A signaling
B0010760biological_processnegative regulation of macrophage chemotaxis
B0016853molecular_functionisomerase activity
B0019752biological_processcarboxylic acid metabolic process
B0030330biological_processDNA damage response, signal transduction by p53 class mediator
B0030336biological_processnegative regulation of cell migration
B0030890biological_processpositive regulation of B cell proliferation
B0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
B0031982cellular_componentvesicle
B0032760biological_processpositive regulation of tumor necrosis factor production
B0033033biological_processnegative regulation of myeloid cell apoptotic process
B0033138biological_processpositive regulation of peptidyl-serine phosphorylation
B0034774cellular_componentsecretory granule lumen
B0042056molecular_functionchemoattractant activity
B0042127biological_processregulation of cell population proliferation
B0042327biological_processpositive regulation of phosphorylation
B0042802molecular_functionidentical protein binding
B0043030biological_processregulation of macrophage activation
B0043066biological_processnegative regulation of apoptotic process
B0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
B0045087biological_processinnate immune response
B0048146biological_processpositive regulation of fibroblast proliferation
B0050178molecular_functionphenylpyruvate tautomerase activity
B0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
B0050918biological_processpositive chemotaxis
B0051248biological_processnegative regulation of protein metabolic process
B0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
B0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
B0070062cellular_componentextracellular exosome
B0070207biological_processprotein homotrimerization
B0070374biological_processpositive regulation of ERK1 and ERK2 cascade
B0090238biological_processpositive regulation of arachidonic acid secretion
B0090398biological_processcellular senescence
B1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
B1904813cellular_componentficolin-1-rich granule lumen
B2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
B2000773biological_processnegative regulation of cellular senescence
C0001516biological_processprostaglandin biosynthetic process
C0001819biological_processpositive regulation of cytokine production
C0001934biological_processpositive regulation of protein phosphorylation
C0002020molecular_functionprotease binding
C0002906biological_processnegative regulation of mature B cell apoptotic process
C0004167molecular_functiondopachrome isomerase activity
C0005125molecular_functioncytokine activity
C0005126molecular_functioncytokine receptor binding
C0005515molecular_functionprotein binding
C0005576cellular_componentextracellular region
C0005615cellular_componentextracellular space
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005886cellular_componentplasma membrane
C0006954biological_processinflammatory response
C0007166biological_processcell surface receptor signaling pathway
C0008284biological_processpositive regulation of cell population proliferation
C0009986cellular_componentcell surface
C0010629biological_processnegative regulation of gene expression
C0010739biological_processpositive regulation of protein kinase A signaling
C0010760biological_processnegative regulation of macrophage chemotaxis
C0016853molecular_functionisomerase activity
C0019752biological_processcarboxylic acid metabolic process
C0030330biological_processDNA damage response, signal transduction by p53 class mediator
C0030336biological_processnegative regulation of cell migration
C0030890biological_processpositive regulation of B cell proliferation
C0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
C0031982cellular_componentvesicle
C0032760biological_processpositive regulation of tumor necrosis factor production
C0033033biological_processnegative regulation of myeloid cell apoptotic process
C0033138biological_processpositive regulation of peptidyl-serine phosphorylation
C0034774cellular_componentsecretory granule lumen
C0042056molecular_functionchemoattractant activity
C0042127biological_processregulation of cell population proliferation
C0042327biological_processpositive regulation of phosphorylation
C0042802molecular_functionidentical protein binding
C0043030biological_processregulation of macrophage activation
C0043066biological_processnegative regulation of apoptotic process
C0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
C0045087biological_processinnate immune response
C0048146biological_processpositive regulation of fibroblast proliferation
C0050178molecular_functionphenylpyruvate tautomerase activity
C0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
C0050918biological_processpositive chemotaxis
C0051248biological_processnegative regulation of protein metabolic process
C0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
C0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
C0070062cellular_componentextracellular exosome
C0070207biological_processprotein homotrimerization
C0070374biological_processpositive regulation of ERK1 and ERK2 cascade
C0090238biological_processpositive regulation of arachidonic acid secretion
C0090398biological_processcellular senescence
C1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
C1904813cellular_componentficolin-1-rich granule lumen
C2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
C2000773biological_processnegative regulation of cellular senescence
D0001516biological_processprostaglandin biosynthetic process
D0001819biological_processpositive regulation of cytokine production
D0001934biological_processpositive regulation of protein phosphorylation
D0002020molecular_functionprotease binding
D0002906biological_processnegative regulation of mature B cell apoptotic process
D0004167molecular_functiondopachrome isomerase activity
D0005125molecular_functioncytokine activity
D0005126molecular_functioncytokine receptor binding
D0005515molecular_functionprotein binding
D0005576cellular_componentextracellular region
D0005615cellular_componentextracellular space
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006954biological_processinflammatory response
D0007166biological_processcell surface receptor signaling pathway
D0008284biological_processpositive regulation of cell population proliferation
D0009986cellular_componentcell surface
D0010629biological_processnegative regulation of gene expression
D0010739biological_processpositive regulation of protein kinase A signaling
D0010760biological_processnegative regulation of macrophage chemotaxis
D0016853molecular_functionisomerase activity
D0019752biological_processcarboxylic acid metabolic process
D0030330biological_processDNA damage response, signal transduction by p53 class mediator
D0030336biological_processnegative regulation of cell migration
D0030890biological_processpositive regulation of B cell proliferation
D0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
D0031982cellular_componentvesicle
D0032760biological_processpositive regulation of tumor necrosis factor production
D0033033biological_processnegative regulation of myeloid cell apoptotic process
D0033138biological_processpositive regulation of peptidyl-serine phosphorylation
D0034774cellular_componentsecretory granule lumen
D0042056molecular_functionchemoattractant activity
D0042127biological_processregulation of cell population proliferation
D0042327biological_processpositive regulation of phosphorylation
D0042802molecular_functionidentical protein binding
D0043030biological_processregulation of macrophage activation
D0043066biological_processnegative regulation of apoptotic process
D0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
D0045087biological_processinnate immune response
D0048146biological_processpositive regulation of fibroblast proliferation
D0050178molecular_functionphenylpyruvate tautomerase activity
D0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
D0050918biological_processpositive chemotaxis
D0051248biological_processnegative regulation of protein metabolic process
D0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
D0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
D0070062cellular_componentextracellular exosome
D0070207biological_processprotein homotrimerization
D0070374biological_processpositive regulation of ERK1 and ERK2 cascade
D0090238biological_processpositive regulation of arachidonic acid secretion
D0090398biological_processcellular senescence
D1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
D1904813cellular_componentficolin-1-rich granule lumen
D2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
D2000773biological_processnegative regulation of cellular senescence
E0001516biological_processprostaglandin biosynthetic process
E0001819biological_processpositive regulation of cytokine production
E0001934biological_processpositive regulation of protein phosphorylation
E0002020molecular_functionprotease binding
E0002906biological_processnegative regulation of mature B cell apoptotic process
E0004167molecular_functiondopachrome isomerase activity
E0005125molecular_functioncytokine activity
E0005126molecular_functioncytokine receptor binding
E0005515molecular_functionprotein binding
E0005576cellular_componentextracellular region
E0005615cellular_componentextracellular space
E0005654cellular_componentnucleoplasm
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005886cellular_componentplasma membrane
E0006954biological_processinflammatory response
E0007166biological_processcell surface receptor signaling pathway
E0008284biological_processpositive regulation of cell population proliferation
E0009986cellular_componentcell surface
E0010629biological_processnegative regulation of gene expression
E0010739biological_processpositive regulation of protein kinase A signaling
E0010760biological_processnegative regulation of macrophage chemotaxis
E0016853molecular_functionisomerase activity
E0019752biological_processcarboxylic acid metabolic process
E0030330biological_processDNA damage response, signal transduction by p53 class mediator
E0030336biological_processnegative regulation of cell migration
E0030890biological_processpositive regulation of B cell proliferation
E0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
E0031982cellular_componentvesicle
E0032760biological_processpositive regulation of tumor necrosis factor production
E0033033biological_processnegative regulation of myeloid cell apoptotic process
E0033138biological_processpositive regulation of peptidyl-serine phosphorylation
E0034774cellular_componentsecretory granule lumen
E0042056molecular_functionchemoattractant activity
E0042127biological_processregulation of cell population proliferation
E0042327biological_processpositive regulation of phosphorylation
E0042802molecular_functionidentical protein binding
E0043030biological_processregulation of macrophage activation
E0043066biological_processnegative regulation of apoptotic process
E0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
E0045087biological_processinnate immune response
E0048146biological_processpositive regulation of fibroblast proliferation
E0050178molecular_functionphenylpyruvate tautomerase activity
E0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
E0050918biological_processpositive chemotaxis
E0051248biological_processnegative regulation of protein metabolic process
E0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
E0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
E0070062cellular_componentextracellular exosome
E0070207biological_processprotein homotrimerization
E0070374biological_processpositive regulation of ERK1 and ERK2 cascade
E0090238biological_processpositive regulation of arachidonic acid secretion
E0090398biological_processcellular senescence
E1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
E1904813cellular_componentficolin-1-rich granule lumen
E2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
E2000773biological_processnegative regulation of cellular senescence
F0001516biological_processprostaglandin biosynthetic process
F0001819biological_processpositive regulation of cytokine production
F0001934biological_processpositive regulation of protein phosphorylation
F0002020molecular_functionprotease binding
F0002906biological_processnegative regulation of mature B cell apoptotic process
F0004167molecular_functiondopachrome isomerase activity
F0005125molecular_functioncytokine activity
F0005126molecular_functioncytokine receptor binding
F0005515molecular_functionprotein binding
F0005576cellular_componentextracellular region
F0005615cellular_componentextracellular space
F0005654cellular_componentnucleoplasm
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005886cellular_componentplasma membrane
F0006954biological_processinflammatory response
F0007166biological_processcell surface receptor signaling pathway
F0008284biological_processpositive regulation of cell population proliferation
F0009986cellular_componentcell surface
F0010629biological_processnegative regulation of gene expression
F0010739biological_processpositive regulation of protein kinase A signaling
F0010760biological_processnegative regulation of macrophage chemotaxis
F0016853molecular_functionisomerase activity
F0019752biological_processcarboxylic acid metabolic process
F0030330biological_processDNA damage response, signal transduction by p53 class mediator
F0030336biological_processnegative regulation of cell migration
F0030890biological_processpositive regulation of B cell proliferation
F0031666biological_processpositive regulation of lipopolysaccharide-mediated signaling pathway
F0031982cellular_componentvesicle
F0032760biological_processpositive regulation of tumor necrosis factor production
F0033033biological_processnegative regulation of myeloid cell apoptotic process
F0033138biological_processpositive regulation of peptidyl-serine phosphorylation
F0034774cellular_componentsecretory granule lumen
F0042056molecular_functionchemoattractant activity
F0042127biological_processregulation of cell population proliferation
F0042327biological_processpositive regulation of phosphorylation
F0042802molecular_functionidentical protein binding
F0043030biological_processregulation of macrophage activation
F0043066biological_processnegative regulation of apoptotic process
F0043518biological_processnegative regulation of DNA damage response, signal transduction by p53 class mediator
F0045087biological_processinnate immune response
F0048146biological_processpositive regulation of fibroblast proliferation
F0050178molecular_functionphenylpyruvate tautomerase activity
F0050731biological_processpositive regulation of peptidyl-tyrosine phosphorylation
F0050918biological_processpositive chemotaxis
F0051248biological_processnegative regulation of protein metabolic process
F0061078biological_processpositive regulation of prostaglandin secretion involved in immune response
F0061081biological_processpositive regulation of myeloid leukocyte cytokine production involved in immune response
F0070062cellular_componentextracellular exosome
F0070207biological_processprotein homotrimerization
F0070374biological_processpositive regulation of ERK1 and ERK2 cascade
F0090238biological_processpositive regulation of arachidonic acid secretion
F0090398biological_processcellular senescence
F1902166biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
F1904813cellular_componentficolin-1-rich granule lumen
F2000343biological_processpositive regulation of chemokine (C-X-C motif) ligand 2 production
F2000773biological_processnegative regulation of cellular senescence
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue SO4 A 201
ChainResidue
AGLY69
AGLY70
AALA71
AGLN72

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 202
ChainResidue
AASP17
AGLY18
APHE19
ALEU20
ASER21

site_idAC3
Number of Residues4
Detailsbinding site for residue GOL A 203
ChainResidue
A4N72
ALYS33
AILE65
AHOH301

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 204
ChainResidue
AGLY66
ALYS67
AGLN72
AHOH343

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 B 201
ChainResidue
BASP17
BGLY18
BPHE19
BLEU20
BSER21

site_idAC6
Number of Residues6
Detailsbinding site for residue SO4 C 201
ChainResidue
CGLY69
CGLY70
CALA71
CGLN72
CHOH303
CHOH342

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 C 202
ChainResidue
CARG74
CHOH319

site_idAC8
Number of Residues1
Detailsbinding site for residue SO4 C 203
ChainResidue
CARG87

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL C 204
ChainResidue
CLYS67
CILE68
CGLN72
CHOH335
CHOH352

site_idAD1
Number of Residues2
Detailsbinding site for residue GOL C 205
ChainResidue
C4N72
CHOH301

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 D 201
ChainResidue
DGLY69
DGLY70
DALA71
DGLN72

site_idAD3
Number of Residues1
Detailsbinding site for residue SO4 D 202
ChainResidue
DLYS67

site_idAD4
Number of Residues2
Detailsbinding site for residue SO4 D 203
ChainResidue
DPRO16
DASP17

site_idAD5
Number of Residues6
Detailsbinding site for residue SO4 D 204
ChainResidue
DASP17
DGLY18
DPHE19
DLEU20
DSER21
DHOH301

site_idAD6
Number of Residues4
Detailsbinding site for residue SO4 E 201
ChainResidue
EGLY69
EGLY70
EALA71
EGLN72

site_idAD7
Number of Residues3
Detailsbinding site for residue SO4 E 202
ChainResidue
EGLY66
ELYS67
EHOH333

site_idAD8
Number of Residues2
Detailsbinding site for residue SO4 E 203
ChainResidue
EARG74
EHOH321

site_idAD9
Number of Residues5
Detailsbinding site for residue SO4 E 204
ChainResidue
EASP17
EGLY18
EPHE19
ELEU20
ESER21

site_idAE1
Number of Residues2
Detailsbinding site for residue GOL E 205
ChainResidue
BPHE114
EPHE114

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 F 201
ChainResidue
FGLY69
FGLY70
FALA71
FGLN72

site_idAE3
Number of Residues5
Detailsbinding site for residue GOL F 202
ChainResidue
FPRO16
FGLY18
FPHE19
FLEU20
FSER21

site_idAE4
Number of Residues3
Detailsbinding site for residue GOL F 203
ChainResidue
FGLY66
FLYS67
FGLN72

site_idAE5
Number of Residues3
Detailsbinding site for residue GOL F 204
ChainResidue
F4N72
FLYS33
FPHE114

Functional Information from PROSITE/UniProt
site_idPS01158
Number of Residues15
DetailsMIF Macrophage migration inhibitory factor family signature. EPCAlcsLhSIGkIG
ChainResidueDetails
AGLU55-GLY69

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: Proton acceptor; via imino nitrogen => ECO:0000250|UniProtKB:P34884
ChainResidueDetails
A4N72
B4N72
C4N72
D4N72
E4N72
F4N72

site_idSWS_FT_FI2
Number of Residues18
DetailsBINDING: BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
ChainResidueDetails
ALYS33
DLYS33
DILE65
DASN98
ELYS33
EILE65
EASN98
FLYS33
FILE65
FASN98
AILE65
AASN98
BLYS33
BILE65
BASN98
CLYS33
CILE65
CASN98

site_idSWS_FT_FI3
Number of Residues6
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P34884
ChainResidueDetails
ALYS78
BLYS78
CLYS78
DLYS78
ELYS78
FLYS78

222415

PDB entries from 2024-07-10

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