4YYY
X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with uridine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004645 | molecular_function | 1,4-alpha-oligoglucan phosphorylase activity |
A | 0005829 | cellular_component | cytosol |
A | 0006206 | biological_process | pyrimidine nucleobase metabolic process |
A | 0006213 | biological_process | pyrimidine nucleoside metabolic process |
A | 0009032 | molecular_function | thymidine phosphorylase activity |
A | 0016154 | molecular_function | pyrimidine-nucleoside phosphorylase activity |
A | 0016757 | molecular_function | glycosyltransferase activity |
A | 0016763 | molecular_function | pentosyltransferase activity |
A | 0046104 | biological_process | thymidine metabolic process |
B | 0004645 | molecular_function | 1,4-alpha-oligoglucan phosphorylase activity |
B | 0005829 | cellular_component | cytosol |
B | 0006206 | biological_process | pyrimidine nucleobase metabolic process |
B | 0006213 | biological_process | pyrimidine nucleoside metabolic process |
B | 0009032 | molecular_function | thymidine phosphorylase activity |
B | 0016154 | molecular_function | pyrimidine-nucleoside phosphorylase activity |
B | 0016757 | molecular_function | glycosyltransferase activity |
B | 0016763 | molecular_function | pentosyltransferase activity |
B | 0046104 | biological_process | thymidine metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | binding site for residue CIT A 501 |
Chain | Residue |
A | LYS84 |
A | HIS85 |
A | SER86 |
A | SER95 |
A | SER113 |
A | THR123 |
A | LYS191 |
site_id | AC2 |
Number of Residues | 2 |
Details | binding site for residue CIT A 502 |
Chain | Residue |
A | SER186 |
A | ILE187 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue PGE A 503 |
Chain | Residue |
A | TYR267 |
A | ASP385 |
A | THR439 |
A | GLU440 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue URI B 501 |
Chain | Residue |
B | THR87 |
B | LEU117 |
B | GLY118 |
B | TYR168 |
B | ARG171 |
B | ILE183 |
B | SER186 |
B | ILE187 |
B | LYS190 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue URI B 502 |
Chain | Residue |
A | LYS291 |
B | SER248 |
B | GLN261 |
B | TYR267 |
site_id | AC6 |
Number of Residues | 9 |
Details | binding site for residue CIT B 503 |
Chain | Residue |
B | LYS84 |
B | HIS85 |
B | SER86 |
B | SER95 |
B | ILE112 |
B | SER113 |
B | GLY114 |
B | THR123 |
B | LYS191 |
Functional Information from PROSITE/UniProt
site_id | PS00647 |
Number of Residues | 16 |
Details | THYMID_PHOSPHORYLASE Thymidine and pyrimidine-nucleoside phosphorylases signature. SGRGLghTGGTlDkLE |
Chain | Residue | Details |
A | SER113-GLU128 |