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4YYW

Ficin D2

Functional Information from GO Data
ChainGOidnamespacecontents
A0004197molecular_functioncysteine-type endopeptidase activity
A0005615cellular_componentextracellular space
A0005764cellular_componentlysosome
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
A0051603biological_processproteolysis involved in protein catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue SO4 A 301
ChainResidue
AGLY20
ALYS21
ACYS22
AARG81
AALA93
AARG94
ATHR104
AHOH448
AHOH581

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 A 302
ChainResidue
ALEU1
ALEU1
ALYS125
ALYS125
AHOH434
AHOH493
AHOH493

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 303
ChainResidue
ALYS39
ATHR44
ALEU45
AHOH433
AHOH547

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 304
ChainResidue
AASP71
ATYR113
AASP115
AHOH411
AHOH565

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 305
ChainResidue
AASP55
AASP62
ALYS95
AALA97
ACYS98
AHOH515

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 306
ChainResidue
APRO2
AGLU3
ATHR4
AHOH431
AHOH486

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 307
ChainResidue
AASP18
AASP18
AGLY185
ATHR186
AHOH465

site_idAC8
Number of Residues7
Detailsbinding site for residue SO4 A 308
ChainResidue
APRO117
AALA118
AHOH419
AHOH459
AHOH474
AHOH511
AHOH600

site_idAC9
Number of Residues16
Detailsbinding site for Ligand residues SCH A 25 through TRP A 26 bound to SER A 24
ChainResidue
AGLN19
AGLY23
ASER24
AVAL27
APHE28
ASER29
AVAL30
ALEU53
APRO58
ASER59
AGLY64
AGLY67
AGLY68
AMET70
AHIS162
AALA163

Functional Information from PROSITE/UniProt
site_idPS00139
Number of Residues12
DetailsTHIOL_PROTEASE_CYS Eukaryotic thiol (cysteine) proteases cysteine active site. QGkCGSCWVfSV
ChainResidueDetails
AGLN19-VAL30

site_idPS00639
Number of Residues11
DetailsTHIOL_PROTEASE_HIS Eukaryotic thiol (cysteine) proteases histidine active site. NDHAVVVVGYG
ChainResidueDetails
AASN160-GLY170

site_idPS00640
Number of Residues20
DetailsTHIOL_PROTEASE_ASN Eukaryotic thiol (cysteine) proteases asparagine active site. YWLvRNSWgtkWGeeGYMkL
ChainResidueDetails
ATYR177-LEU196

226707

PDB entries from 2024-10-30

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