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4YU7

Crystal structure of Piratoxin I (PrTX-I) complexed to caffeic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0004623molecular_functionphospholipase A2 activity
A0005509molecular_functioncalcium ion binding
A0005543molecular_functionphospholipid binding
A0005576cellular_componentextracellular region
A0006644biological_processphospholipid metabolic process
A0016042biological_processlipid catabolic process
A0035821biological_processmodulation of process of another organism
A0042130biological_processnegative regulation of T cell proliferation
A0047498molecular_functioncalcium-dependent phospholipase A2 activity
A0050482biological_processarachidonic acid secretion
A0090729molecular_functiontoxin activity
B0004623molecular_functionphospholipase A2 activity
B0005509molecular_functioncalcium ion binding
B0005543molecular_functionphospholipid binding
B0005576cellular_componentextracellular region
B0006644biological_processphospholipid metabolic process
B0016042biological_processlipid catabolic process
B0035821biological_processmodulation of process of another organism
B0042130biological_processnegative regulation of T cell proliferation
B0047498molecular_functioncalcium-dependent phospholipase A2 activity
B0050482biological_processarachidonic acid secretion
B0090729molecular_functiontoxin activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PE4 B 201
ChainResidue
APRO113
BGLY6
BPRO17
BTYR21

site_idAC2
Number of Residues6
Detailsbinding site for residue PE4 B 202
ChainResidue
BTRP68
BPHE3
BLYS7
BLEU10
BGLN11
BTYR66

site_idAC3
Number of Residues7
Detailsbinding site for residue DHC B 203
ChainResidue
ALEU111
BLYS15
BASN16
BPRO80
BHOH307
BHOH314
BHOH357

site_idAC4
Number of Residues5
Detailsbinding site for residue DHC B 204
ChainResidue
BLYS19
BTHR55
BLYS105
BARG108
BHOH307

site_idAC5
Number of Residues5
Detailsbinding site for residue PE4 A 201
ChainResidue
ALEU2
AGLY6
APRO17
ATYR21
AHOH307

site_idAC6
Number of Residues6
Detailsbinding site for residue SO4 A 202
ChainResidue
AGLY32
AARG33
ALYS52
AHOH343
AHOH346
AHOH364

site_idAC7
Number of Residues10
Detailsbinding site for residue DHC A 203
ChainResidue
ATHR72
AILE94
AARG97
AGLU98
AHOH303
AHOH309
AHOH359
BLYS35
BPRO36
BARG42

site_idAC8
Number of Residues8
Detailsbinding site for residue DHC A 204
ChainResidue
ALYS15
ALYS19
ALYS105
AARG108
AHOH301
AHOH370
BTHR55
BGLY56

Functional Information from PROSITE/UniProt
site_idPS00118
Number of Residues8
DetailsPA2_HIS Phospholipase A2 histidine active site. CCYvHKcC
ChainResidueDetails
BCYS43-CYS50

site_idPS00119
Number of Residues11
DetailsPA2_ASP Phospholipase A2 aspartic acid active site. LCECDKAVaIC
ChainResidueDetails
BLEU85-CYS95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSITE: Important residue of the cationic membrane-docking site (MDoS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
BLYS105
BARG108
ALYS105
AARG108

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Hydrophobic membrane-disruption site (MDiS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
BLEU111
BPHE114
ALEU111
APHE114

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Cationic membrane-docking site (MDoS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
BLYS112
BLYS117
ALYS112
ALYS117

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PDB entries from 2024-07-31

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