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4YMZ

DHAP bound Leptospira Interrogans Triosephosphate Isomerase (LiTIM)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004807molecular_functiontriose-phosphate isomerase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006094biological_processgluconeogenesis
A0006096biological_processglycolytic process
A0016853molecular_functionisomerase activity
A0019563biological_processglycerol catabolic process
A0046166biological_processglyceraldehyde-3-phosphate biosynthetic process
B0004807molecular_functiontriose-phosphate isomerase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006094biological_processgluconeogenesis
B0006096biological_processglycolytic process
B0016853molecular_functionisomerase activity
B0019563biological_processglycerol catabolic process
B0046166biological_processglyceraldehyde-3-phosphate biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue 13P A 301
ChainResidue
AASN10
AGLY238
AGLY239
ASO4302
AHOH451
AHOH456
AHOH537
AHOH548
AHOH551
AHOH552
ALYS12
AHIS97
AGLU169
AALA173
AILE174
AGLY175
ASER217
ALEU236

site_idAC2
Number of Residues13
Detailsbinding site for residue SO4 A 302
ChainResidue
ALYS12
AALA173
AILE174
AGLY175
AGLY216
ASER217
AGLY238
AGLY239
A13P301
AHOH451
AHOH456
AHOH537
AHOH548

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 303
ChainResidue
AGLU50
AASN51
BGLU50
BASN51

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO A 304
ChainResidue
AARG116
AILE156
APHE160

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 305
ChainResidue
ASER204
AGLU208
AHOH401
BARG136
BGLN184

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO A 306
ChainResidue
ASER146
ASER147
AARG150
AGLU151
AHOH463

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO A 307
ChainResidue
ALYS4
ASER162
ALEU164
AILE210
ASER211

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 308
ChainResidue
APRO220
AASP221
AASN222
AILE223
AGLN224
AASP225

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 309
ChainResidue
ALEU104
AHOH553
BGLY105

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 310
ChainResidue
AGLU143
APHE191
AHOH419

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 311
ChainResidue
BLEU133
BTRP172
BGLN184

site_idAD3
Number of Residues17
Detailsbinding site for residue 13P B 301
ChainResidue
BASN10
BLYS12
BHIS97
BGLU169
BALA173
BILE174
BGLY175
BSER217
BLEU236
BGLY238
BGLY239
BSO4302
BHOH444
BHOH501
BHOH532
BHOH533
BHOH534

site_idAD4
Number of Residues12
Detailsbinding site for residue SO4 B 302
ChainResidue
BALA173
BILE174
BGLY175
BSER217
BGLY238
BGLY239
B13P301
BHOH444
BHOH501
BHOH532
BHOH533
BHOH534

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO B 303
ChainResidue
BPHE160
BHOH450
BHOH524
BARG116
BLYS120

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO B 304
ChainResidue
AARG136
AGLN184
BGLY202
BEDO305
BHOH405

site_idAD7
Number of Residues5
Detailsbinding site for residue EDO B 305
ChainResidue
ATRP172
ALYS178
AGLN184
BEDO304
BHOH404

site_idAD8
Number of Residues1
Detailsbinding site for residue EDO B 306
ChainResidue
BVAL159

site_idAD9
Number of Residues3
Detailsbinding site for residue EDO B 307
ChainResidue
BHIS70
BPHE117
BHOH539

site_idAE1
Number of Residues3
Detailsbinding site for residue EDO B 308
ChainResidue
AHOH431
AHOH553
BPHE103

Functional Information from PROSITE/UniProt
site_idPS00171
Number of Residues11
DetailsTIM_1 Triosephosphate isomerase active site. AYEPVWAIGTG
ChainResidueDetails
AALA167-GLY177

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Electrophile => ECO:0000255|HAMAP-Rule:MF_00147
ChainResidueDetails
AHIS97
BHIS97

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00147
ChainResidueDetails
AGLU169
BGLU169

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00147
ChainResidueDetails
AASN10
AGLY175
ASER217
AGLY238
BASN10
BGLY175
BSER217
BGLY238

222036

PDB entries from 2024-07-03

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