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4Y9F

Crystal structure of V30M mutated transthyretin with bromide in complex with gamma-mangostin

Functional Information from GO Data
ChainGOidnamespacecontents
A0042572biological_processretinol metabolic process
A0070324molecular_functionthyroid hormone binding
A0070327biological_processthyroid hormone transport
B0042572biological_processretinol metabolic process
B0070324molecular_functionthyroid hormone binding
B0070327biological_processthyroid hormone transport
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue MKT A 201
ChainResidue
ALYS15
ATHR119
AVAL121
ABR202
ABR202
ABR203
ALEU17
ATHR106
AALA108
AALA108
ALEU110
ASER117
ASER117
ATHR119

site_idAC2
Number of Residues6
Detailsbinding site for residue BR A 202
ChainResidue
AALA108
ASER117
ATHR118
ATHR119
AMKT201
AMKT201

site_idAC3
Number of Residues1
Detailsbinding site for residue BR A 203
ChainResidue
AMKT201

site_idAC4
Number of Residues1
Detailsbinding site for residue BR A 204
ChainResidue
AHIS31

site_idAC5
Number of Residues1
Detailsbinding site for residue BR A 205
ChainResidue
AGLU51

site_idAC6
Number of Residues2
Detailsbinding site for residue BR A 206
ChainResidue
ALYS35
BHIS90

site_idAC7
Number of Residues11
Detailsbinding site for residue MKT B 200
ChainResidue
BLYS15
BLEU17
BALA108
BSER117
BSER117
BTHR119
BTHR119
BVAL121
BBR201
BBR202
BBR202

site_idAC8
Number of Residues1
Detailsbinding site for residue BR B 201
ChainResidue
BMKT200

site_idAC9
Number of Residues5
Detailsbinding site for residue BR B 202
ChainResidue
BSER117
BTHR118
BTHR119
BMKT200
BMKT200

site_idAD1
Number of Residues3
Detailsbinding site for residue BR B 203
ChainResidue
AHIS90
AHOH310
BLYS35

Functional Information from PROSITE/UniProt
site_idPS00769
Number of Residues13
DetailsTRANSTHYRETIN_2 Transthyretin signature 2. YTIAalLSPYSYS
ChainResidueDetails
ATYR105-SER117

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:11418763, ECO:0007744|PDB:1ICT
ChainResidueDetails
ALYS15
AGLU54
ASER117
BLYS15
BGLU54
BSER117

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Sulfocysteine => ECO:0000269|PubMed:17175208, ECO:0007744|PDB:2H4E
ChainResidueDetails
ACYS10
BCYS10

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: 4-carboxyglutamate; in a patient with Moyamoya disease => ECO:0000269|PubMed:18221012
ChainResidueDetails
AGLU42
BGLU42

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P02767
ChainResidueDetails
ASER52
BSER52

site_idSWS_FT_FI5
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19167329
ChainResidueDetails
AASN98
BASN98

223166

PDB entries from 2024-07-31

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