4Y1P
Crystal structure of 3-isopropylmalate dehydrogenase (Saci_0600) from Sulfolobus acidocaldarius complex with 3-isopropylmalate and Mg2+
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003862 | molecular_function | 3-isopropylmalate dehydrogenase activity |
A | 0004449 | molecular_function | isocitrate dehydrogenase (NAD+) activity |
A | 0006099 | biological_process | tricarboxylic acid cycle |
A | 0006102 | biological_process | isocitrate metabolic process |
A | 0009098 | biological_process | L-leucine biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
A | 0046872 | molecular_function | metal ion binding |
A | 0051287 | molecular_function | NAD binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003862 | molecular_function | 3-isopropylmalate dehydrogenase activity |
B | 0004449 | molecular_function | isocitrate dehydrogenase (NAD+) activity |
B | 0006099 | biological_process | tricarboxylic acid cycle |
B | 0006102 | biological_process | isocitrate metabolic process |
B | 0009098 | biological_process | L-leucine biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
B | 0046872 | molecular_function | metal ion binding |
B | 0051287 | molecular_function | NAD binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 6 |
詳細 | binding site for residue MG A 401 |
鎖名 | 残基 |
A | ASP201 |
A | ASP225 |
A | ASP229 |
A | IPM402 |
A | HOH501 |
A | HOH522 |
site_id | AC2 |
残基数 | 14 |
詳細 | binding site for residue IPM A 402 |
鎖名 | 残基 |
A | ARG117 |
A | TYR124 |
A | LYS170 |
A | VAL173 |
A | ASP201 |
A | ASP225 |
A | MG401 |
A | HOH501 |
A | HOH520 |
A | HOH522 |
A | HOH595 |
A | ALA78 |
A | ARG86 |
A | ARG96 |
site_id | AC3 |
残基数 | 3 |
詳細 | binding site for residue SO4 A 403 |
鎖名 | 残基 |
A | ASP291 |
A | ILE292 |
A | ARG293 |
site_id | AC4 |
残基数 | 3 |
詳細 | binding site for residue SO4 A 404 |
鎖名 | 残基 |
A | GLU197 |
A | MET198 |
A | TYR199 |
site_id | AC5 |
残基数 | 2 |
詳細 | binding site for residue SO4 A 405 |
鎖名 | 残基 |
A | ARG160 |
B | LYS163 |
site_id | AC6 |
残基数 | 5 |
詳細 | binding site for residue MG B 401 |
鎖名 | 残基 |
B | ASP201 |
B | ASP225 |
B | IPM402 |
B | HOH503 |
B | HOH524 |
site_id | AC7 |
残基数 | 11 |
詳細 | binding site for residue IPM B 402 |
鎖名 | 残基 |
B | ARG86 |
B | ARG96 |
B | ARG117 |
B | TYR124 |
B | LYS170 |
B | VAL173 |
B | ASP201 |
B | ASP225 |
B | MG401 |
B | HOH503 |
B | HOH524 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00470 |
残基数 | 20 |
詳細 | IDH_IMDH Isocitrate and isopropylmalate dehydrogenases signature. NTYGDIlSDeaGqia.GSLGI |
鎖名 | 残基 | 詳細 |
A | ASN221-ILE240 |