4Y1M

An Escherichia coli yybP-ykoY Mn riboswitch in the Mn2+-free state

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue SR B 201

Chain	Residue
B	G9
B	G10
B	A11
B	A45
B	U49

---

site_id	AC2
Number of Residues	2
Details	binding site for residue SR B 202

Chain	Residue
B	G25
B	HOH337

---

site_id	AC3
Number of Residues	2
Details	binding site for residue SR B 203

Chain	Residue
B	U34
B	HOH345

---

site_id	AC4
Number of Residues	3
Details	binding site for residue SR B 204

Chain	Residue
B	U42
B	G65
B	HOH311

---

site_id	AC5
Number of Residues	2
Details	binding site for residue SR B 205

Chain	Residue
B	G9
B	HOH315

---

site_id	AC6
Number of Residues	3
Details	binding site for residue SR B 206

Chain	Residue
B	G10
B	C46
B	U48

---

site_id	AC7
Number of Residues	1
Details	binding site for residue SR B 208

Chain	Residue
B	G94

---

site_id	AC8
Number of Residues	2
Details	binding site for residue SR B 210

Chain	Residue
B	HOH307
B	HOH335

---

site_id	AC9
Number of Residues	3
Details	binding site for residue MG B 211

Chain	Residue
B	A76
B	C77
B	HOH325

---

site_id	AD1
Number of Residues	5
Details	binding site for residue GTP B 212

Chain	Residue
A	C108
A	GTP208
B	G2
B	A26
B	C108

---

site_id	AD2
Number of Residues	3
Details	binding site for residue SR B 213

Chain	Residue
B	A45
B	C46
B	HOH301

---

site_id	AD3
Number of Residues	2
Details	binding site for residue SR B 214

Chain	Residue
B	G12
B	G97

---

site_id	AD4
Number of Residues	1
Details	binding site for residue SR B 215

Chain	Residue
B	U51

---

site_id	AD5
Number of Residues	1
Details	binding site for residue SR B 216

Chain	Residue
B	G56

---

site_id	AD6
Number of Residues	3
Details	binding site for residue SR B 218

Chain	Residue
B	HOH323
B	HOH338
B	HOH353

---

site_id	AD7
Number of Residues	1
Details	binding site for residue SR B 219

Chain	Residue
B	C46

---

site_id	AD8
Number of Residues	1
Details	binding site for residue SR B 222

Chain	Residue
B	HOH349

---

site_id	AD9
Number of Residues	2
Details	binding site for residue SR B 223

Chain	Residue
B	U106
B	HOH308

---

site_id	AE1
Number of Residues	2
Details	binding site for residue SR B 225

Chain	Residue
B	HOH342
B	HOH343

---

site_id	AE2
Number of Residues	1
Details	binding site for residue SR B 228

Chain	Residue
B	G74

---

site_id	AE3
Number of Residues	1
Details	binding site for residue SR B 229

Chain	Residue
B	G65

---

site_id	AE4
Number of Residues	1
Details	binding site for residue SR B 233

Chain	Residue
B	A57

---

site_id	AE5
Number of Residues	1
Details	binding site for residue SR B 238

Chain	Residue
B	HOH355

---

site_id	AE6
Number of Residues	1
Details	binding site for residue SR B 239

Chain	Residue
B	HOH350

---

site_id	AE7
Number of Residues	1
Details	binding site for residue SR B 240

Chain	Residue
A	HOH305

---

site_id	AE8
Number of Residues	2
Details	binding site for residue SR B 243

Chain	Residue
B	HOH339
B	HOH348

---

site_id	AE9
Number of Residues	4
Details	binding site for residue SR B 244

Chain	Residue
B	G82
B	HOH314
B	HOH319
B	HOH351

---

site_id	AF1
Number of Residues	1
Details	binding site for residue SR B 245

Chain	Residue
B	G18

---

site_id	AF2
Number of Residues	1
Details	binding site for residue MG B 246

Chain	Residue
B	C107

---

site_id	AF3
Number of Residues	2
Details	binding site for residue SR A 201

Chain	Residue
A	U42
A	G65

---

site_id	AF4
Number of Residues	2
Details	binding site for residue SR A 203

Chain	Residue
A	G56
A	HOH308

---

site_id	AF5
Number of Residues	1
Details	binding site for residue SR A 204

Chain	Residue
A	U104

---

site_id	AF6
Number of Residues	2
Details	binding site for residue SR A 205

Chain	Residue
A	A93
A	G94

---

site_id	AF7
Number of Residues	1
Details	binding site for residue SR A 207

Chain	Residue
A	A44

---

site_id	AF8
Number of Residues	5
Details	binding site for residue GTP A 208

Chain	Residue
A	G2
A	C108
B	C108
B	GTP212
B	HOH360

---

site_id	AF9
Number of Residues	4
Details	binding site for residue SR A 209

Chain	Residue
A	G9
A	G10
A	A11
A	A45

---

site_id	AG1
Number of Residues	1
Details	binding site for residue SR A 212

Chain	Residue
A	A44

---

site_id	AG2
Number of Residues	1
Details	binding site for residue SR A 214

Chain	Residue
A	G9

---

site_id	AG3
Number of Residues	3
Details	binding site for residue SR A 215

Chain	Residue
A	A45
A	C46
A	A47

---

site_id	AG4
Number of Residues	1
Details	binding site for residue SR A 216

Chain	Residue
A	U4

---

site_id	AG5
Number of Residues	1
Details	binding site for residue SR A 217

Chain	Residue
A	G56

---

site_id	AG6
Number of Residues	3
Details	binding site for residue SR A 218

Chain	Residue
A	U71
A	HOH301
A	HOH309

---

site_id	AG7
Number of Residues	2
Details	binding site for residue SR A 219

Chain	Residue
A	G12
A	G97

---

site_id	AG8
Number of Residues	1
Details	binding site for residue SR A 220

Chain	Residue
A	U51

---

site_id	AG9
Number of Residues	1
Details	binding site for residue SR A 221

Chain	Residue
A	C46

---

site_id	AH1
Number of Residues	1
Details	binding site for residue SR A 222

Chain	Residue
A	C46

---

site_id	AH2
Number of Residues	1
Details	binding site for residue MG A 225

Chain	Residue
A	U64

---