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4Y1I

Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue GTP A 201
ChainResidue
AA3
AC101
AGTP226
BC101
BC102

site_idAC2
Number of Residues1
Detailsbinding site for residue MG A 203
ChainResidue
AU64

site_idAC3
Number of Residues2
Detailsbinding site for residue MG A 204
ChainResidue
AA3
AHOH320

site_idAC4
Number of Residues2
Detailsbinding site for residue MG A 205
ChainResidue
AG62
AC31

site_idAC5
Number of Residues2
Detailsbinding site for residue MG A 206
ChainResidue
AG21
AA22

site_idAC6
Number of Residues6
Detailsbinding site for residue MG A 207
ChainResidue
AG8
AG9
AA10
AU39
AC45
AHOH310

site_idAC7
Number of Residues4
Detailsbinding site for residue MG A 208
ChainResidue
AC59
AC60
BU43
BG94

site_idAC8
Number of Residues1
Detailsbinding site for residue MG A 209
ChainResidue
AC45

site_idAC9
Number of Residues1
Detailsbinding site for residue MG A 210
ChainResidue
AU68

site_idAD1
Number of Residues2
Detailsbinding site for residue MG A 211
ChainResidue
AU100
AGTP226

site_idAD2
Number of Residues4
Detailsbinding site for residue MG A 212
ChainResidue
AG9
AU43
AG94
AHOH319

site_idAD3
Number of Residues4
Detailsbinding site for residue BA A 213
ChainResidue
AG35
AU36
AG61
AG62

site_idAD4
Number of Residues2
Detailsbinding site for residue BA A 214
ChainResidue
AG6
AHOH309

site_idAD5
Number of Residues1
Detailsbinding site for residue BA A 215
ChainResidue
AG51

site_idAD6
Number of Residues1
Detailsbinding site for residue BA A 216
ChainResidue
AG21

site_idAD7
Number of Residues2
Detailsbinding site for residue BA A 217
ChainResidue
AG21
AHOH321

site_idAD8
Number of Residues1
Detailsbinding site for residue BA A 218
ChainResidue
AA79

site_idAD9
Number of Residues1
Detailsbinding site for residue BA A 220
ChainResidue
AG8

site_idAE1
Number of Residues2
Detailsbinding site for residue BA A 221
ChainResidue
AU39
AC40

site_idAE2
Number of Residues1
Detailsbinding site for residue BA A 222
ChainResidue
AA13

site_idAE3
Number of Residues1
Detailsbinding site for residue BA A 223
ChainResidue
AG46

site_idAE4
Number of Residues6
Detailsbinding site for residue MN A 224
ChainResidue
AG9
AU39
AC40
AA41
AU44
AC45

site_idAE5
Number of Residues2
Detailsbinding site for residue MN A 225
ChainResidue
AG81
AHOH314

site_idAE6
Number of Residues6
Detailsbinding site for residue GTP A 226
ChainResidue
AC101
AC102
AGTP201
AMG211
BA3
BC101

site_idAE7
Number of Residues4
Detailsbinding site for residue MG B 201
ChainResidue
BA13
BHOH306
BHOH307
BHOH308

site_idAE8
Number of Residues3
Detailsbinding site for residue MG B 202
ChainResidue
BA71
BU84
BG85

site_idAE9
Number of Residues3
Detailsbinding site for residue MG B 203
ChainResidue
BG16
BHOH309
BHOH332

site_idAF1
Number of Residues1
Detailsbinding site for residue MG B 204
ChainResidue
BG48

site_idAF2
Number of Residues2
Detailsbinding site for residue MG B 205
ChainResidue
BA23
BA24

site_idAF3
Number of Residues6
Detailsbinding site for residue MG B 206
ChainResidue
BG8
BG9
BA10
BU39
BC45
BHOH311

site_idAF4
Number of Residues1
Detailsbinding site for residue MG B 207
ChainResidue
BU68

site_idAF5
Number of Residues1
Detailsbinding site for residue MG B 208
ChainResidue
BA33

site_idAF6
Number of Residues1
Detailsbinding site for residue MG B 209
ChainResidue
BHOH322

site_idAF7
Number of Residues1
Detailsbinding site for residue MG B 210
ChainResidue
BHOH325

site_idAF8
Number of Residues2
Detailsbinding site for residue MG B 211
ChainResidue
BC31
BG62

site_idAF9
Number of Residues1
Detailsbinding site for residue MG B 212
ChainResidue
BG8

site_idAG1
Number of Residues1
Detailsbinding site for residue MG B 213
ChainResidue
BA33

site_idAG2
Number of Residues1
Detailsbinding site for residue MG B 214
ChainResidue
BU43

site_idAG3
Number of Residues1
Detailsbinding site for residue BA B 215
ChainResidue
BG21

site_idAG4
Number of Residues4
Detailsbinding site for residue BA B 217
ChainResidue
BG35
BU36
BG61
BG62

site_idAG5
Number of Residues1
Detailsbinding site for residue BA B 218
ChainResidue
BHOH305

site_idAG6
Number of Residues1
Detailsbinding site for residue BA B 219
ChainResidue
BG8

site_idAG7
Number of Residues2
Detailsbinding site for residue BA B 221
ChainResidue
BG19
BG21

site_idAG8
Number of Residues6
Detailsbinding site for residue MN B 223
ChainResidue
BC40
BA41
BU44
BC45
BG9
BU39

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PDB entries from 2024-07-10

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