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4XZ3

Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 (Se-Met derivative) in complex with coenzyme A and Mg-AMPPCP, phosphohistidine segment pointing towards nucleotide binding site

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0043758molecular_functionacetate-CoA ligase (ADP-forming) activity
A0046872molecular_functionmetal ion binding
B0005524molecular_functionATP binding
B0046872molecular_functionmetal ion binding
C0000166molecular_functionnucleotide binding
C0043758molecular_functionacetate-CoA ligase (ADP-forming) activity
C0046872molecular_functionmetal ion binding
D0005524molecular_functionATP binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue COA A 501
ChainResidue
AVAL16
APRO76
ALYS79
AVAL83
AILE98
ATHR99
ASER100
AASN129
AILE130
APHE144
AGLY161
AGLY17
ASER19
ALYS24
AILE25
AASN46
APRO47
ASER74
AVAL75

site_idAC2
Number of Residues11
Detailsbinding site for residue ACP A 502
ChainResidue
AGLY307
AGLY308
AGLY309
APHE343
AALA344
ASER345
AMG503
CASN129
CSER160
CGLY161
CALA162

site_idAC3
Number of Residues1
Detailsbinding site for residue MG A 503
ChainResidue
AACP502

site_idAC4
Number of Residues12
Detailsbinding site for residue ACP B 300
ChainResidue
BLYS60
BGLN111
BGLU112
BPHE113
BALA114
BVAL223
BASP224
BARG226
BMG301
BHOH402
BHOH405
BHOH410

site_idAC5
Number of Residues3
Detailsbinding site for residue MG B 301
ChainResidue
BASP224
BACP300
BHOH411

site_idAC6
Number of Residues10
Detailsbinding site for residue ACP C 501
ChainResidue
AGLU104
AASN129
ASER160
AGLY161
AALA162
CGLY308
CGLY309
CPHE343
CSER345
CMG502

site_idAC7
Number of Residues2
Detailsbinding site for residue MG C 502
ChainResidue
CASP351
CACP501

site_idAC8
Number of Residues1
Detailsbinding site for residue MG C 503
ChainResidue
CASP66

site_idAC9
Number of Residues17
Detailsbinding site for residue COA C 504
ChainResidue
CVAL16
CGLY17
CSER19
CLYS24
CILE25
CASN46
CPRO47
CSER74
CVAL75
CPRO76
CLYS79
CVAL83
CILE98
CSER100
CASN129
CILE130
CGLY161

site_idAD1
Number of Residues8
Detailsbinding site for residue ACP D 300
ChainResidue
DSER70
DGLN111
DGLU112
DALA114
DVAL223
DASP224
DARG226
DMG301

site_idAD2
Number of Residues3
Detailsbinding site for residue MG D 301
ChainResidue
DASN211
DASP224
DACP300

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PDB entries from 2024-11-13

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