Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XYD

Nitric oxide reductase from Roseobacter denitrificans (RdNOR)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004129molecular_functioncytochrome-c oxidase activity
A0009060biological_processaerobic respiration
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0016966molecular_functionnitric oxide reductase activity
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0070469cellular_componentrespirasome
A1902600biological_processproton transmembrane transport
B0009055molecular_functionelectron transfer activity
B0016020cellular_componentmembrane
B0016491molecular_functionoxidoreductase activity
B0016966molecular_functionnitric oxide reductase activity
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue HEM A 501
ChainResidue
AGLN23
AGLU122
AHIS336
APHE339
AVAL344
AMET380
AARG419
AVAL427
ACA503
AHEM504
BALA73
AVAL24
BTYR74
AGLY27
ALEU28
ALEU30
ATYR34
AARG50
AHIS53
ALEU57

site_idAC2
Number of Residues5
Detailsbinding site for residue CA A 503
ChainResidue
AGLU122
AHEM501
AHEM504
BGLY72
BTYR74

site_idAC3
Number of Residues25
Detailsbinding site for residue HEM A 504
ChainResidue
AGLU122
APHE123
ATRP190
AVAL197
AGLU198
AHIS245
AHIS246
AGLU267
APHE271
AALA309
AGLY313
APHE314
AHIS316
ATHR317
AASN322
AHIS326
AGLY327
ATHR331
AHIS334
AALA338
APHE339
ATYR343
AHEM501
ACA503
AHOH609

site_idAC4
Number of Residues4
Detailsbinding site for residue FE A 505
ChainResidue
AHIS194
AGLU198
AHIS245
AHIS246

site_idAC5
Number of Residues19
Detailsbinding site for residue HEC B 201
ChainResidue
AASN47
AMET406
BGLY61
BCYS62
BCYS65
BHIS66
BALA76
BPRO77
BLEU79
BARG85
BTRP86
BLEU99
BTRP102
BARG113
BARG114
BGLN115
BMET116
BPRO117
BHOH303

site_idAC6
Number of Residues4
Detailsbinding site for residue CU B 202
ChainResidue
BGLU49
BHIS52
BGLU124
BHOH304

Functional Information from PROSITE/UniProt
site_idPS00077
Number of Residues57
DetailsCOX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WYVVHLwVegtwelvmasvlaflmlkltgvdreiiekwlylivatalfsgilgtgHH
ChainResidueDetails
ATRP190-HIS246

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon