4XLZ
N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
A | 0006506 | biological_process | GPI anchor biosynthetic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
B | 0006506 | biological_process | GPI anchor biosynthetic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
C | 0006506 | biological_process | GPI anchor biosynthetic process |
C | 0046872 | molecular_function | metal ion binding |
D | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
D | 0006506 | biological_process | GPI anchor biosynthetic process |
D | 0046872 | molecular_function | metal ion binding |
E | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
E | 0006506 | biological_process | GPI anchor biosynthetic process |
E | 0046872 | molecular_function | metal ion binding |
F | 0000225 | molecular_function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
F | 0006506 | biological_process | GPI anchor biosynthetic process |
F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue CD A 301 |
Chain | Residue |
A | HIS40 |
A | ASP43 |
A | HIS151 |
A | TRS313 |
A | HOH637 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue CD A 302 |
Chain | Residue |
C | MSE1 |
A | GLU225 |
A | CL316 |
A | CL317 |
A | CL318 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue CD A 303 |
Chain | Residue |
A | ASP265 |
A | HOH520 |
A | HOH547 |
A | HOH627 |
B | HIS193 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue CD A 304 |
Chain | Residue |
A | HIS193 |
A | HOH420 |
C | ASP265 |
C | HOH524 |
C | HOH539 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue HEZ A 305 |
Chain | Residue |
A | PRO141 |
A | TRS314 |
A | CL319 |
A | HOH423 |
A | HOH490 |
C | PHE156 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue HEZ A 306 |
Chain | Residue |
A | GLN166 |
A | SER183 |
A | VAL184 |
A | PHE186 |
A | ILE187 |
A | MSE253 |
A | HOH455 |
A | HOH549 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue HEZ A 307 |
Chain | Residue |
A | GLU93 |
A | VAL101 |
A | ARG102 |
A | LYS103 |
A | ILE104 |
A | HOH499 |
site_id | AC8 |
Number of Residues | 10 |
Details | binding site for residue HEZ A 308 |
Chain | Residue |
A | ASP76 |
A | GLU77 |
A | LYS78 |
A | LEU79 |
A | SER80 |
A | HOH473 |
C | PRO168 |
C | ASN169 |
C | HOH591 |
E | ARG89 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue HEZ A 309 |
Chain | Residue |
A | ILE159 |
A | ALA163 |
A | ILE187 |
A | HOH532 |
B | SER147 |
B | HIS148 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue HEZ A 310 |
Chain | Residue |
A | PHE237 |
A | LYS241 |
A | HOH515 |
C | PHE8 |
site_id | AD2 |
Number of Residues | 2 |
Details | binding site for residue HEZ A 311 |
Chain | Residue |
A | PHE28 |
A | TYR197 |
site_id | AD3 |
Number of Residues | 6 |
Details | binding site for residue HEZ A 312 |
Chain | Residue |
A | PRO195 |
A | ASN196 |
A | TYR197 |
A | ILE198 |
A | ILE242 |
A | HOH567 |
site_id | AD4 |
Number of Residues | 11 |
Details | binding site for residue TRS A 313 |
Chain | Residue |
A | HIS40 |
A | ASP42 |
A | ASP43 |
A | ILE46 |
A | HIS151 |
A | CD301 |
A | HOH493 |
A | HOH534 |
A | HOH558 |
A | HOH637 |
C | HIS259 |
site_id | AD5 |
Number of Residues | 12 |
Details | binding site for residue TRS A 314 |
Chain | Residue |
A | ARG153 |
A | HEZ305 |
A | CL319 |
A | HOH490 |
B | ARG153 |
B | HEZ304 |
B | CL315 |
B | HOH480 |
C | ARG153 |
C | HEZ303 |
C | CL312 |
C | HOH482 |
site_id | AD6 |
Number of Residues | 5 |
Details | binding site for residue CL A 315 |
Chain | Residue |
A | MSE1 |
B | CD302 |
B | CL313 |
E | PHE2 |
E | GLU3 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue CL A 316 |
Chain | Residue |
F | PHE2 |
F | GLU3 |
A | CD302 |
A | CL318 |
C | MSE1 |
site_id | AD8 |
Number of Residues | 3 |
Details | binding site for residue CL A 317 |
Chain | Residue |
A | GLU225 |
A | CD302 |
F | PHE2 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue CL A 318 |
Chain | Residue |
A | GLU225 |
A | CD302 |
A | CL316 |
F | PHE2 |
F | ASN4 |
F | VAL5 |
site_id | AE1 |
Number of Residues | 4 |
Details | binding site for residue CL A 319 |
Chain | Residue |
A | ARG152 |
A | ARG153 |
A | HEZ305 |
A | TRS314 |
site_id | AE2 |
Number of Residues | 5 |
Details | binding site for residue CD B 301 |
Chain | Residue |
B | HIS40 |
B | ASP43 |
B | HIS151 |
B | TRS311 |
B | HOH619 |
site_id | AE3 |
Number of Residues | 5 |
Details | binding site for residue CD B 302 |
Chain | Residue |
A | MSE1 |
A | CL315 |
B | GLU225 |
B | CL312 |
B | CL313 |
site_id | AE4 |
Number of Residues | 4 |
Details | binding site for residue CD B 303 |
Chain | Residue |
B | ASP265 |
B | HOH606 |
B | HOH618 |
C | HIS193 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue HEZ B 304 |
Chain | Residue |
A | PHE156 |
A | TRS314 |
B | CL315 |
B | HOH423 |
B | HOH480 |
site_id | AE6 |
Number of Residues | 9 |
Details | binding site for residue HEZ B 305 |
Chain | Residue |
B | GLN166 |
B | SER183 |
B | VAL184 |
B | PHE186 |
B | ILE187 |
B | MSE253 |
B | HEZ307 |
B | HOH453 |
B | HOH604 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue HEZ B 306 |
Chain | Residue |
B | GLU93 |
B | VAL101 |
B | LYS103 |
B | ILE104 |
B | HOH506 |
site_id | AE8 |
Number of Residues | 4 |
Details | binding site for residue HEZ B 307 |
Chain | Residue |
B | ILE159 |
B | ALA163 |
B | ILE187 |
B | HEZ305 |
site_id | AE9 |
Number of Residues | 7 |
Details | binding site for residue HEZ B 308 |
Chain | Residue |
B | GLY73 |
B | THR74 |
B | THR75 |
B | ASP76 |
B | SER217 |
B | ILE223 |
B | HOH577 |
site_id | AF1 |
Number of Residues | 4 |
Details | binding site for residue HEZ B 309 |
Chain | Residue |
A | PHE8 |
B | PHE237 |
B | LYS241 |
B | HOH500 |
site_id | AF2 |
Number of Residues | 2 |
Details | binding site for residue HEZ B 310 |
Chain | Residue |
B | PHE28 |
B | GLU58 |
site_id | AF3 |
Number of Residues | 10 |
Details | binding site for residue TRS B 311 |
Chain | Residue |
A | HIS259 |
B | ASP42 |
B | ASP43 |
B | ILE46 |
B | HIS151 |
B | CD301 |
B | HOH486 |
B | HOH526 |
B | HOH592 |
B | HOH619 |
site_id | AF4 |
Number of Residues | 3 |
Details | binding site for residue CL B 312 |
Chain | Residue |
B | GLU225 |
B | CD302 |
E | PHE2 |
site_id | AF5 |
Number of Residues | 7 |
Details | binding site for residue CL B 313 |
Chain | Residue |
A | CL315 |
B | GLU225 |
B | CD302 |
E | PHE2 |
E | ASN4 |
E | VAL5 |
E | LYS14 |
site_id | AF6 |
Number of Residues | 5 |
Details | binding site for residue CL B 314 |
Chain | Residue |
B | MSE1 |
C | CD302 |
C | CL311 |
D | PHE2 |
D | GLU3 |
site_id | AF7 |
Number of Residues | 4 |
Details | binding site for residue CL B 315 |
Chain | Residue |
A | TRS314 |
B | ARG152 |
B | ARG153 |
B | HEZ304 |
site_id | AF8 |
Number of Residues | 5 |
Details | binding site for residue CD C 301 |
Chain | Residue |
C | HIS40 |
C | ASP43 |
C | HIS151 |
C | TRS309 |
C | HOH640 |
site_id | AF9 |
Number of Residues | 5 |
Details | binding site for residue CD C 302 |
Chain | Residue |
B | MSE1 |
B | CL314 |
C | GLU225 |
C | CL310 |
C | CL311 |
site_id | AG1 |
Number of Residues | 7 |
Details | binding site for residue HEZ C 303 |
Chain | Residue |
A | TRS314 |
B | PHE156 |
C | PRO141 |
C | ARG152 |
C | CL312 |
C | HOH426 |
C | HOH482 |
site_id | AG2 |
Number of Residues | 9 |
Details | binding site for residue HEZ C 304 |
Chain | Residue |
C | GLN166 |
C | SER183 |
C | VAL184 |
C | PHE186 |
C | ILE187 |
C | MSE253 |
C | HEZ306 |
C | HOH461 |
C | HOH557 |
site_id | AG3 |
Number of Residues | 5 |
Details | binding site for residue HEZ C 305 |
Chain | Residue |
C | GLU93 |
C | VAL101 |
C | LYS103 |
C | ILE104 |
C | HOH510 |
site_id | AG4 |
Number of Residues | 5 |
Details | binding site for residue HEZ C 306 |
Chain | Residue |
A | SER147 |
C | ILE159 |
C | ALA163 |
C | ILE187 |
C | HEZ304 |
site_id | AG5 |
Number of Residues | 1 |
Details | binding site for residue HEZ C 307 |
Chain | Residue |
C | TYR197 |
site_id | AG6 |
Number of Residues | 7 |
Details | binding site for residue HEZ C 308 |
Chain | Residue |
C | PRO195 |
C | ASN196 |
C | TYR197 |
C | ILE198 |
C | LYS241 |
C | ILE242 |
C | HOH580 |
site_id | AG7 |
Number of Residues | 11 |
Details | binding site for residue TRS C 309 |
Chain | Residue |
B | HIS259 |
C | HIS40 |
C | ASP42 |
C | ASP43 |
C | ILE46 |
C | HIS151 |
C | CD301 |
C | HOH476 |
C | HOH567 |
C | HOH639 |
C | HOH640 |
site_id | AG8 |
Number of Residues | 2 |
Details | binding site for residue CL C 310 |
Chain | Residue |
C | CD302 |
D | PHE2 |
site_id | AG9 |
Number of Residues | 7 |
Details | binding site for residue CL C 311 |
Chain | Residue |
B | CL314 |
C | GLU225 |
C | CD302 |
D | PHE2 |
D | ASN4 |
D | VAL5 |
D | LYS14 |
site_id | AH1 |
Number of Residues | 4 |
Details | binding site for residue CL C 312 |
Chain | Residue |
A | TRS314 |
C | ARG152 |
C | ARG153 |
C | HEZ303 |
site_id | AH2 |
Number of Residues | 5 |
Details | binding site for residue CD D 301 |
Chain | Residue |
D | HIS40 |
D | ASP43 |
D | HIS151 |
D | TRS314 |
D | HOH633 |
site_id | AH3 |
Number of Residues | 5 |
Details | binding site for residue CD D 302 |
Chain | Residue |
D | GLU225 |
D | CL317 |
D | CL318 |
D | CL319 |
F | MSE1 |
site_id | AH4 |
Number of Residues | 5 |
Details | binding site for residue CD D 303 |
Chain | Residue |
D | ASP265 |
D | HOH512 |
D | HOH618 |
D | HOH624 |
E | HIS193 |
site_id | AH5 |
Number of Residues | 5 |
Details | binding site for residue CD D 304 |
Chain | Residue |
D | HIS193 |
F | ASP265 |
F | HOH533 |
F | HOH614 |
F | HOH620 |
site_id | AH6 |
Number of Residues | 6 |
Details | binding site for residue HEZ D 305 |
Chain | Residue |
D | TRS315 |
D | CL320 |
D | HOH437 |
D | HOH477 |
F | PHE156 |
F | HEZ303 |
site_id | AH7 |
Number of Residues | 9 |
Details | binding site for residue HEZ D 306 |
Chain | Residue |
D | GLN166 |
D | SER183 |
D | VAL184 |
D | PHE186 |
D | ILE187 |
D | MSE253 |
D | HEZ308 |
D | HOH448 |
D | HOH611 |
site_id | AH8 |
Number of Residues | 5 |
Details | binding site for residue HEZ D 307 |
Chain | Residue |
D | PRO195 |
D | ASN196 |
D | TYR197 |
D | ILE198 |
D | ILE242 |
site_id | AH9 |
Number of Residues | 5 |
Details | binding site for residue HEZ D 308 |
Chain | Residue |
D | ILE159 |
D | ALA163 |
D | ILE187 |
D | HEZ306 |
E | HIS148 |
site_id | AI1 |
Number of Residues | 5 |
Details | binding site for residue HEZ D 309 |
Chain | Residue |
D | GLU93 |
D | VAL101 |
D | LYS103 |
D | ILE104 |
D | HOH494 |
site_id | AI2 |
Number of Residues | 4 |
Details | binding site for residue HEZ D 310 |
Chain | Residue |
D | TRP142 |
D | ASP265 |
E | PRO144 |
E | TYR145 |
site_id | AI3 |
Number of Residues | 9 |
Details | binding site for residue HEZ D 311 |
Chain | Residue |
D | GLU113 |
D | PRO115 |
D | TYR116 |
D | ARG153 |
D | HOH425 |
D | HOH491 |
D | HOH616 |
F | HOH452 |
F | HOH594 |
site_id | AI4 |
Number of Residues | 5 |
Details | binding site for residue HEZ D 312 |
Chain | Residue |
D | PHE237 |
D | GLU240 |
D | LYS241 |
D | HOH510 |
F | PHE8 |
site_id | AI5 |
Number of Residues | 3 |
Details | binding site for residue HEZ D 313 |
Chain | Residue |
D | PHE28 |
D | GLU58 |
D | TYR197 |
site_id | AI6 |
Number of Residues | 11 |
Details | binding site for residue TRS D 314 |
Chain | Residue |
D | HIS40 |
D | ASP42 |
D | ASP43 |
D | ILE46 |
D | HIS151 |
D | CD301 |
D | HOH463 |
D | HOH570 |
D | HOH626 |
D | HOH633 |
F | HIS259 |
site_id | AI7 |
Number of Residues | 12 |
Details | binding site for residue TRS D 315 |
Chain | Residue |
D | ARG153 |
D | HEZ305 |
D | CL320 |
D | HOH477 |
E | ARG153 |
E | HEZ304 |
E | CL317 |
E | HOH479 |
F | ARG153 |
F | HEZ303 |
F | CL312 |
F | HOH504 |
site_id | AI8 |
Number of Residues | 6 |
Details | binding site for residue CL D 316 |
Chain | Residue |
B | PHE2 |
B | GLU3 |
B | ASN4 |
D | MSE1 |
E | CD302 |
E | CL315 |
site_id | AI9 |
Number of Residues | 3 |
Details | binding site for residue CL D 317 |
Chain | Residue |
C | PHE2 |
D | GLU225 |
D | CD302 |
site_id | AJ1 |
Number of Residues | 6 |
Details | binding site for residue CL D 318 |
Chain | Residue |
C | PHE2 |
C | ASN4 |
C | VAL5 |
D | GLU225 |
D | CD302 |
D | CL319 |
site_id | AJ2 |
Number of Residues | 6 |
Details | binding site for residue CL D 319 |
Chain | Residue |
C | PHE2 |
C | GLU3 |
C | HOH414 |
D | CD302 |
D | CL318 |
F | MSE1 |
site_id | AJ3 |
Number of Residues | 4 |
Details | binding site for residue CL D 320 |
Chain | Residue |
D | ARG152 |
D | ARG153 |
D | HEZ305 |
D | TRS315 |
site_id | AJ4 |
Number of Residues | 5 |
Details | binding site for residue CD E 301 |
Chain | Residue |
E | HIS40 |
E | ASP43 |
E | HIS151 |
E | TRS313 |
E | HOH634 |
site_id | AJ5 |
Number of Residues | 5 |
Details | binding site for residue CD E 302 |
Chain | Residue |
D | MSE1 |
D | CL316 |
E | GLU225 |
E | CL314 |
E | CL315 |
site_id | AJ6 |
Number of Residues | 5 |
Details | binding site for residue CD E 303 |
Chain | Residue |
E | ASP265 |
E | HOH504 |
E | HOH616 |
E | HOH621 |
F | HIS193 |
site_id | AJ7 |
Number of Residues | 7 |
Details | binding site for residue HEZ E 304 |
Chain | Residue |
D | PHE156 |
D | TRS315 |
E | PRO141 |
E | ARG152 |
E | CL317 |
E | HOH431 |
E | HOH479 |
site_id | AJ8 |
Number of Residues | 5 |
Details | binding site for residue HEZ E 305 |
Chain | Residue |
E | GLU93 |
E | VAL101 |
E | LYS103 |
E | ILE104 |
E | HOH549 |
site_id | AJ9 |
Number of Residues | 9 |
Details | binding site for residue HEZ E 306 |
Chain | Residue |
E | GLN166 |
E | SER183 |
E | VAL184 |
E | PHE186 |
E | ILE187 |
E | MSE253 |
E | HOH444 |
E | HOH575 |
E | HOH591 |
site_id | AK1 |
Number of Residues | 8 |
Details | binding site for residue HEZ E 307 |
Chain | Residue |
E | GLY73 |
E | THR74 |
E | THR75 |
E | ASP76 |
E | SER217 |
E | GLN218 |
E | ILE223 |
E | HOH589 |
site_id | AK2 |
Number of Residues | 5 |
Details | binding site for residue HEZ E 308 |
Chain | Residue |
E | ILE159 |
E | ALA163 |
E | ILE187 |
E | TYR258 |
F | SER147 |
site_id | AK3 |
Number of Residues | 6 |
Details | binding site for residue HEZ E 309 |
Chain | Residue |
E | TRP142 |
E | LYS194 |
E | HOH562 |
F | PRO144 |
F | TYR145 |
F | HOH443 |
site_id | AK4 |
Number of Residues | 4 |
Details | binding site for residue HEZ E 310 |
Chain | Residue |
D | PHE8 |
E | PHE237 |
E | LYS241 |
E | HOH513 |
site_id | AK5 |
Number of Residues | 6 |
Details | binding site for residue HEZ E 311 |
Chain | Residue |
E | PRO195 |
E | ASN196 |
E | TYR197 |
E | ILE198 |
E | ILE242 |
E | HOH606 |
site_id | AK6 |
Number of Residues | 2 |
Details | binding site for residue HEZ E 312 |
Chain | Residue |
E | PHE28 |
E | TYR197 |
site_id | AK7 |
Number of Residues | 11 |
Details | binding site for residue TRS E 313 |
Chain | Residue |
D | HIS259 |
E | HIS40 |
E | ASP42 |
E | ASP43 |
E | ILE46 |
E | HIS151 |
E | CD301 |
E | HOH489 |
E | HOH583 |
E | HOH623 |
E | HOH634 |
site_id | AK8 |
Number of Residues | 3 |
Details | binding site for residue CL E 314 |
Chain | Residue |
B | PHE2 |
E | GLU225 |
E | CD302 |
site_id | AK9 |
Number of Residues | 6 |
Details | binding site for residue CL E 315 |
Chain | Residue |
B | PHE2 |
B | ASN4 |
B | LYS14 |
D | CL316 |
E | GLU225 |
E | CD302 |
site_id | AL1 |
Number of Residues | 6 |
Details | binding site for residue CL E 316 |
Chain | Residue |
A | PHE2 |
A | GLU3 |
A | HOH415 |
E | MSE1 |
F | CD302 |
F | CL311 |
site_id | AL2 |
Number of Residues | 4 |
Details | binding site for residue CL E 317 |
Chain | Residue |
D | TRS315 |
E | ARG152 |
E | ARG153 |
E | HEZ304 |
site_id | AL3 |
Number of Residues | 5 |
Details | binding site for residue CD F 301 |
Chain | Residue |
F | HIS40 |
F | ASP43 |
F | HIS151 |
F | TRS309 |
F | HOH637 |
site_id | AL4 |
Number of Residues | 5 |
Details | binding site for residue CD F 302 |
Chain | Residue |
E | MSE1 |
E | CL316 |
F | GLU225 |
F | CL310 |
F | CL311 |
site_id | AL5 |
Number of Residues | 7 |
Details | binding site for residue HEZ F 303 |
Chain | Residue |
D | HEZ305 |
D | TRS315 |
F | PRO141 |
F | ARG152 |
F | CL312 |
F | HOH426 |
F | HOH504 |
site_id | AL6 |
Number of Residues | 9 |
Details | binding site for residue HEZ F 304 |
Chain | Residue |
F | GLN166 |
F | SER183 |
F | VAL184 |
F | PHE186 |
F | ILE187 |
F | MSE253 |
F | HOH447 |
F | HOH551 |
F | HOH603 |
site_id | AL7 |
Number of Residues | 2 |
Details | binding site for residue HEZ F 305 |
Chain | Residue |
F | ILE159 |
F | ALA163 |
site_id | AL8 |
Number of Residues | 5 |
Details | binding site for residue HEZ F 306 |
Chain | Residue |
F | GLU93 |
F | VAL101 |
F | LYS103 |
F | ILE104 |
F | HOH509 |
site_id | AL9 |
Number of Residues | 3 |
Details | binding site for residue HEZ F 307 |
Chain | Residue |
F | PHE28 |
F | GLU58 |
F | TYR197 |
site_id | AM1 |
Number of Residues | 6 |
Details | binding site for residue HEZ F 308 |
Chain | Residue |
F | PRO195 |
F | ASN196 |
F | TYR197 |
F | ILE198 |
F | ILE242 |
F | HOH583 |
site_id | AM2 |
Number of Residues | 11 |
Details | binding site for residue TRS F 309 |
Chain | Residue |
E | HIS259 |
F | HIS40 |
F | ASP42 |
F | ASP43 |
F | ILE46 |
F | HIS151 |
F | CD301 |
F | HOH492 |
F | HOH561 |
F | HOH568 |
F | HOH637 |
site_id | AM3 |
Number of Residues | 3 |
Details | binding site for residue CL F 310 |
Chain | Residue |
A | PHE2 |
F | GLU225 |
F | CD302 |
site_id | AM4 |
Number of Residues | 5 |
Details | binding site for residue CL F 311 |
Chain | Residue |
A | PHE2 |
A | ASN4 |
E | CL316 |
F | GLU225 |
F | CD302 |
site_id | AM5 |
Number of Residues | 5 |
Details | binding site for residue CL F 312 |
Chain | Residue |
D | TRS315 |
F | ARG152 |
F | ARG153 |
F | HEZ303 |
F | HOH558 |