4X4S
Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACC and CTP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000049 | molecular_function | tRNA binding |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
A | 0003723 | molecular_function | RNA binding |
A | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0008033 | biological_process | tRNA processing |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0031123 | biological_process | RNA 3'-end processing |
A | 0042245 | biological_process | RNA repair |
A | 0046872 | molecular_function | metal ion binding |
A | 0106354 | biological_process | tRNA surveillance |
A | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
C | 0000049 | molecular_function | tRNA binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
C | 0003723 | molecular_function | RNA binding |
C | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0008033 | biological_process | tRNA processing |
C | 0016779 | molecular_function | nucleotidyltransferase activity |
C | 0031123 | biological_process | RNA 3'-end processing |
C | 0042245 | biological_process | RNA repair |
C | 0046872 | molecular_function | metal ion binding |
C | 0106354 | biological_process | tRNA surveillance |
C | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue CTP A 501 |
Chain | Residue |
A | SER47 |
B | C36 |
B | C37 |
A | ARG50 |
A | THR130 |
A | HIS133 |
A | TYR161 |
A | ALA163 |
A | ARG224 |
A | MG502 |
B | A35 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue MG A 502 |
Chain | Residue |
A | SER47 |
A | GLU59 |
A | ASP61 |
A | CTP501 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue GOL A 503 |
Chain | Residue |
A | ARG209 |
A | GLU222 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue TAR A 504 |
Chain | Residue |
A | HIS240 |
A | ARG243 |
C | GLU352 |
C | VAL355 |
C | LYS356 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue PEG A 505 |
Chain | Residue |
A | PHE349 |
A | GLU352 |
A | VAL355 |
C | HIS240 |
C | ARG243 |
C | GLU247 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue GOL A 506 |
Chain | Residue |
A | ARG317 |
A | SER318 |
C | GLU370 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue GOL A 507 |
Chain | Residue |
A | ARG284 |
A | LYS285 |
A | ASN403 |
A | SER407 |
A | GLU410 |
site_id | AC8 |
Number of Residues | 12 |
Details | binding site for residue CTP C 501 |
Chain | Residue |
C | SER47 |
C | ARG50 |
C | HIS133 |
C | TYR161 |
C | ALA163 |
C | SER171 |
C | TYR173 |
C | ARG224 |
C | MG502 |
D | A35 |
D | C36 |
D | C37 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue MG C 502 |
Chain | Residue |
C | SER47 |
C | GLU59 |
C | ASP61 |
C | CTP501 |
site_id | AD1 |
Number of Residues | 2 |
Details | binding site for residue GOL C 503 |
Chain | Residue |
C | GLU311 |
C | ARG344 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0000269|PubMed:14636575, ECO:0000269|PubMed:25640237, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEU, ECO:0007744|PDB:4X4O, ECO:0007744|PDB:4X4Q, ECO:0007744|PDB:4X4S |
Chain | Residue | Details |
A | SER47 | |
C | SER47 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0000269|PubMed:14636575, ECO:0000269|PubMed:25640237, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEU, ECO:0007744|PDB:4X4Q, ECO:0007744|PDB:4X4S |
Chain | Residue | Details |
A | ARG50 | |
A | HIS133 | |
A | LYS152 | |
A | TYR161 | |
C | ARG50 | |
C | HIS133 | |
C | LYS152 | |
C | TYR161 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0007744|PDB:1UEV |
Chain | Residue | Details |
A | GLU59 | |
C | GLU59 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEV |
Chain | Residue | Details |
A | ASP61 | |
A | ASP110 | |
C | ASP61 | |
C | ASP110 |