4WRK
The 3D structure of D95N mutant DUTPase from phage phi11 of S. aureus reveals the molecular details for the coordination of a structural Mg(II) ion
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0004170 | molecular_function | dUTP diphosphatase activity |
A | 0006226 | biological_process | dUMP biosynthetic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0046081 | biological_process | dUTP catabolic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0004170 | molecular_function | dUTP diphosphatase activity |
B | 0006226 | biological_process | dUMP biosynthetic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0046081 | biological_process | dUTP catabolic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0004170 | molecular_function | dUTP diphosphatase activity |
C | 0006226 | biological_process | dUMP biosynthetic process |
C | 0016787 | molecular_function | hydrolase activity |
C | 0046081 | biological_process | dUTP catabolic process |
C | 0046872 | molecular_function | metal ion binding |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0004170 | molecular_function | dUTP diphosphatase activity |
D | 0006226 | biological_process | dUMP biosynthetic process |
D | 0016787 | molecular_function | hydrolase activity |
D | 0046081 | biological_process | dUTP catabolic process |
D | 0046872 | molecular_function | metal ion binding |
E | 0000287 | molecular_function | magnesium ion binding |
E | 0004170 | molecular_function | dUTP diphosphatase activity |
E | 0006226 | biological_process | dUMP biosynthetic process |
E | 0016787 | molecular_function | hydrolase activity |
E | 0046081 | biological_process | dUTP catabolic process |
E | 0046872 | molecular_function | metal ion binding |
F | 0000287 | molecular_function | magnesium ion binding |
F | 0004170 | molecular_function | dUTP diphosphatase activity |
F | 0006226 | biological_process | dUMP biosynthetic process |
F | 0016787 | molecular_function | hydrolase activity |
F | 0046081 | biological_process | dUTP catabolic process |
F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | binding site for residue DUP A 201 |
Chain | Residue |
A | ARG64 |
B | GLY89 |
A | SER65 |
A | GLY66 |
A | MG202 |
B | GLY78 |
B | LYS79 |
B | ILE80 |
B | ASP81 |
B | TYR84 |
site_id | AC2 |
Number of Residues | 1 |
Details | binding site for residue MG A 202 |
Chain | Residue |
A | DUP201 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue DUP B 201 |
Chain | Residue |
B | ARG64 |
B | SER65 |
B | GLY66 |
B | GLN136 |
B | MG202 |
B | HOH302 |
C | GLY78 |
C | LYS79 |
C | ASP81 |
C | TYR84 |
C | GLY89 |
C | HOH307 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue MG B 202 |
Chain | Residue |
B | DUP201 |
B | HOH301 |
site_id | AC5 |
Number of Residues | 11 |
Details | binding site for residue DUP C 201 |
Chain | Residue |
A | LYS79 |
A | ILE80 |
A | ASP81 |
A | TYR84 |
A | GLY89 |
B | PHE164 |
C | ARG64 |
C | SER65 |
C | GLY66 |
C | GLN136 |
C | MG202 |
site_id | AC6 |
Number of Residues | 2 |
Details | binding site for residue MG C 202 |
Chain | Residue |
C | ASP28 |
C | DUP201 |
site_id | AC7 |
Number of Residues | 13 |
Details | binding site for residue DUP D 201 |
Chain | Residue |
D | ARG64 |
D | SER65 |
D | GLY66 |
D | GLN136 |
D | MG203 |
D | HOH302 |
E | GLY78 |
E | LYS79 |
E | ILE80 |
E | ASP81 |
E | TYR84 |
E | GLY89 |
F | PHE164 |
site_id | AC8 |
Number of Residues | 13 |
Details | binding site for residue DUP D 202 |
Chain | Residue |
D | GLY78 |
D | LYS79 |
D | ILE80 |
D | ASP81 |
D | TYR84 |
D | GLY89 |
E | PHE164 |
F | ARG64 |
F | SER65 |
F | GLY66 |
F | GLN136 |
F | MG202 |
F | HOH309 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue MG D 203 |
Chain | Residue |
D | ASP28 |
D | GLN136 |
D | DUP201 |
site_id | AD1 |
Number of Residues | 1 |
Details | binding site for residue MG E 201 |
Chain | Residue |
F | DUP201 |
site_id | AD2 |
Number of Residues | 12 |
Details | binding site for residue DUP F 201 |
Chain | Residue |
E | ARG64 |
E | SER65 |
E | GLY66 |
E | GLN136 |
E | MG201 |
F | GLY78 |
F | LYS79 |
F | ILE80 |
F | ASP81 |
F | TYR84 |
F | GLY89 |
F | HOH305 |
site_id | AD3 |
Number of Residues | 2 |
Details | binding site for residue MG F 202 |
Chain | Residue |
D | DUP202 |
F | HOH309 |