4WR3
Y274F alanine racemase from E. coli
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005829 | cellular_component | cytosol |
A | 0006522 | biological_process | alanine metabolic process |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008784 | molecular_function | alanine racemase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016853 | molecular_function | isomerase activity |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0030632 | biological_process | D-alanine biosynthetic process |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005829 | cellular_component | cytosol |
B | 0006522 | biological_process | alanine metabolic process |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008784 | molecular_function | alanine racemase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016853 | molecular_function | isomerase activity |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0030632 | biological_process | D-alanine biosynthetic process |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0071555 | biological_process | cell wall organization |
C | 0003824 | molecular_function | catalytic activity |
C | 0005829 | cellular_component | cytosol |
C | 0006522 | biological_process | alanine metabolic process |
C | 0008360 | biological_process | regulation of cell shape |
C | 0008784 | molecular_function | alanine racemase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016853 | molecular_function | isomerase activity |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0030632 | biological_process | D-alanine biosynthetic process |
C | 0042803 | molecular_function | protein homodimerization activity |
C | 0071555 | biological_process | cell wall organization |
D | 0003824 | molecular_function | catalytic activity |
D | 0005829 | cellular_component | cytosol |
D | 0006522 | biological_process | alanine metabolic process |
D | 0008360 | biological_process | regulation of cell shape |
D | 0008784 | molecular_function | alanine racemase activity |
D | 0009252 | biological_process | peptidoglycan biosynthetic process |
D | 0016853 | molecular_function | isomerase activity |
D | 0030170 | molecular_function | pyridoxal phosphate binding |
D | 0030632 | biological_process | D-alanine biosynthetic process |
D | 0042803 | molecular_function | protein homodimerization activity |
D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue PLP A 1001 |
Chain | Residue |
A | TYR38 |
A | HOH1210 |
B | GOL1004 |
A | HIS159 |
A | ALA193 |
A | SER194 |
A | ARG209 |
A | GLY211 |
A | ILE212 |
A | TYR343 |
A | HOH1161 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue SO4 A 1002 |
Chain | Residue |
A | ARG129 |
A | LEU130 |
A | HIS159 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue SO4 A 1003 |
Chain | Residue |
A | ARG266 |
B | ARG19 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue GOL A 1004 |
Chain | Residue |
A | TYR255 |
A | ALA302 |
A | MET303 |
A | ASP304 |
B | ARG129 |
site_id | AC5 |
Number of Residues | 11 |
Details | binding site for residue PLP B 1001 |
Chain | Residue |
B | TYR38 |
B | HIS159 |
B | ALA193 |
B | SER194 |
B | ARG209 |
B | GLY211 |
B | ILE212 |
B | TYR343 |
B | HOH1164 |
B | HOH1222 |
B | HOH1239 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 1002 |
Chain | Residue |
B | ARG129 |
B | LEU130 |
B | HIS159 |
B | HOH1251 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 1003 |
Chain | Residue |
A | ARG19 |
B | ARG266 |
B | HOH1244 |
B | HOH1262 |
site_id | AC8 |
Number of Residues | 7 |
Details | binding site for residue GOL B 1004 |
Chain | Residue |
A | ARG129 |
A | PLP1001 |
B | TYR255 |
B | ALA302 |
B | MET303 |
B | ASP304 |
B | MET305 |
site_id | AC9 |
Number of Residues | 9 |
Details | binding site for residue PLP C 1001 |
Chain | Residue |
C | TYR38 |
C | ALA193 |
C | SER194 |
C | ARG209 |
C | GLY211 |
C | ILE212 |
C | TYR343 |
C | HOH1105 |
D | GOL1002 |
site_id | AD1 |
Number of Residues | 2 |
Details | binding site for residue SO4 C 1002 |
Chain | Residue |
C | ARG19 |
D | ARG266 |
site_id | AD2 |
Number of Residues | 7 |
Details | binding site for residue PLP D 1001 |
Chain | Residue |
D | TYR38 |
D | ALA193 |
D | SER194 |
D | ARG209 |
D | GLY211 |
D | ILE212 |
D | TYR343 |
site_id | AD3 |
Number of Residues | 7 |
Details | binding site for residue GOL D 1002 |
Chain | Residue |
C | ARG129 |
C | PLP1001 |
D | TYR255 |
D | ALA302 |
D | MET303 |
D | ASP304 |
D | MET305 |
Functional Information from PROSITE/UniProt
site_id | PS00395 |
Number of Residues | 11 |
Details | ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANAYGHG |
Chain | Residue | Details |
A | ALA31-GLY41 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor; specific for D-alanine => ECO:0000255|HAMAP-Rule:MF_01201 |
Chain | Residue | Details |
A | LYS34 | |
B | LYS34 | |
C | LYS34 | |
D | LYS34 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor; specific for L-alanine => ECO:0000255|HAMAP-Rule:MF_01201 |
Chain | Residue | Details |
A | TYR255 | |
B | TYR255 | |
C | TYR255 | |
D | TYR255 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000305|PubMed:18434499 |
Chain | Residue | Details |
A | ARG129 | |
A | MET303 | |
B | ARG129 | |
B | MET303 | |
C | ARG129 | |
C | MET303 | |
D | ARG129 | |
D | MET303 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:18434499 |
Chain | Residue | Details |
A | LYS34 | |
B | LYS34 | |
C | LYS34 | |
D | LYS34 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: N6-carboxylysine => ECO:0000269|PubMed:18434499 |
Chain | Residue | Details |
A | LYS122 | |
B | LYS122 | |
C | LYS122 | |
D | LYS122 |