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4WDQ

Crystal structure of haloalkane dehalogenase LinB32 mutant (L177W) from Sphingobium japonicum UT26

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0009636biological_processresponse to toxic substance
A0016787molecular_functionhydrolase activity
A0018786molecular_functionhaloalkane dehalogenase activity
A0042597cellular_componentperiplasmic space
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 301
ChainResidue
AHOH456
AHOH497
AHOH528
AHOH578
AHOH820
AHOH992

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 302
ChainResidue
AHOH944
AHOH536
AHOH424
AHOH523
AHOH806
AHOH828

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 303
ChainResidue
AHOH438
AHOH453
AHOH496
AHOH551
AHOH671
AHOH822

site_idAC4
Number of Residues5
Detailsbinding site for residue CL A 304
ChainResidue
AASN38
ATRP109
APHE169
ATRP207
APRO208

site_idAC5
Number of Residues4
Detailsbinding site for residue CL A 305
ChainResidue
ATHR216
AALA218
AHOH607
AHOH961

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AASP108

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AGLU132

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AHIS272

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:14744129
ChainResidueDetails
AASN38

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:14744129, ECO:0000269|PubMed:17259360, ECO:0007744|PDB:1MJ5, ECO:0007744|PDB:2BFN
ChainResidueDetails
ATRP109

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 467
ChainResidueDetails
AASN38electrostatic stabiliser
AASP108covalent catalysis
ATRP109electrostatic stabiliser
AGLU132activator, electrostatic stabiliser
AHIS272activator, electrostatic stabiliser, proton shuttle (general acid/base)

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PDB entries from 2024-06-12

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