4V9E

Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer Bound to Single-stranded RNA.

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
AA	0003723	molecular_function	RNA binding
AA	0019013	cellular_component	viral nucleocapsid
AA	0019028	cellular_component	viral capsid
AA	0030430	cellular_component	host cell cytoplasm
AA	0042025	cellular_component	host cell nucleus
AA	0042802	molecular_function	identical protein binding
AA	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AA	0044177	cellular_component	host cell Golgi apparatus
AA	0044423	cellular_component	virion component
AA	1990904	cellular_component	ribonucleoprotein complex
AB	0003723	molecular_function	RNA binding
AB	0019013	cellular_component	viral nucleocapsid
AB	0019028	cellular_component	viral capsid
AB	0030430	cellular_component	host cell cytoplasm
AB	0042025	cellular_component	host cell nucleus
AB	0042802	molecular_function	identical protein binding
AB	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AB	0044177	cellular_component	host cell Golgi apparatus
AB	0044423	cellular_component	virion component
AB	1990904	cellular_component	ribonucleoprotein complex
AC	0003723	molecular_function	RNA binding
AC	0019013	cellular_component	viral nucleocapsid
AC	0019028	cellular_component	viral capsid
AC	0030430	cellular_component	host cell cytoplasm
AC	0042025	cellular_component	host cell nucleus
AC	0042802	molecular_function	identical protein binding
AC	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AC	0044177	cellular_component	host cell Golgi apparatus
AC	0044423	cellular_component	virion component
AC	1990904	cellular_component	ribonucleoprotein complex
AD	0003723	molecular_function	RNA binding
AD	0019013	cellular_component	viral nucleocapsid
AD	0019028	cellular_component	viral capsid
AD	0030430	cellular_component	host cell cytoplasm
AD	0042025	cellular_component	host cell nucleus
AD	0042802	molecular_function	identical protein binding
AD	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AD	0044177	cellular_component	host cell Golgi apparatus
AD	0044423	cellular_component	virion component
AD	1990904	cellular_component	ribonucleoprotein complex
AE	0003723	molecular_function	RNA binding
AE	0019013	cellular_component	viral nucleocapsid
AE	0019028	cellular_component	viral capsid
AE	0030430	cellular_component	host cell cytoplasm
AE	0042025	cellular_component	host cell nucleus
AE	0042802	molecular_function	identical protein binding
AE	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AE	0044177	cellular_component	host cell Golgi apparatus
AE	0044423	cellular_component	virion component
AE	1990904	cellular_component	ribonucleoprotein complex
AF	0003723	molecular_function	RNA binding
AF	0019013	cellular_component	viral nucleocapsid
AF	0019028	cellular_component	viral capsid
AF	0030430	cellular_component	host cell cytoplasm
AF	0042025	cellular_component	host cell nucleus
AF	0042802	molecular_function	identical protein binding
AF	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AF	0044177	cellular_component	host cell Golgi apparatus
AF	0044423	cellular_component	virion component
AF	1990904	cellular_component	ribonucleoprotein complex
AG	0003723	molecular_function	RNA binding
AG	0019013	cellular_component	viral nucleocapsid
AG	0019028	cellular_component	viral capsid
AG	0030430	cellular_component	host cell cytoplasm
AG	0042025	cellular_component	host cell nucleus
AG	0042802	molecular_function	identical protein binding
AG	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AG	0044177	cellular_component	host cell Golgi apparatus
AG	0044423	cellular_component	virion component
AG	1990904	cellular_component	ribonucleoprotein complex
AH	0003723	molecular_function	RNA binding
AH	0019013	cellular_component	viral nucleocapsid
AH	0019028	cellular_component	viral capsid
AH	0030430	cellular_component	host cell cytoplasm
AH	0042025	cellular_component	host cell nucleus
AH	0042802	molecular_function	identical protein binding
AH	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AH	0044177	cellular_component	host cell Golgi apparatus
AH	0044423	cellular_component	virion component
AH	1990904	cellular_component	ribonucleoprotein complex
AI	0003723	molecular_function	RNA binding
AI	0019013	cellular_component	viral nucleocapsid
AI	0019028	cellular_component	viral capsid
AI	0030430	cellular_component	host cell cytoplasm
AI	0042025	cellular_component	host cell nucleus
AI	0042802	molecular_function	identical protein binding
AI	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AI	0044177	cellular_component	host cell Golgi apparatus
AI	0044423	cellular_component	virion component
AI	1990904	cellular_component	ribonucleoprotein complex
AJ	0003723	molecular_function	RNA binding
AJ	0019013	cellular_component	viral nucleocapsid
AJ	0019028	cellular_component	viral capsid
AJ	0030430	cellular_component	host cell cytoplasm
AJ	0042025	cellular_component	host cell nucleus
AJ	0042802	molecular_function	identical protein binding
AJ	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AJ	0044177	cellular_component	host cell Golgi apparatus
AJ	0044423	cellular_component	virion component
AJ	1990904	cellular_component	ribonucleoprotein complex
AK	0003723	molecular_function	RNA binding
AK	0019013	cellular_component	viral nucleocapsid
AK	0019028	cellular_component	viral capsid
AK	0030430	cellular_component	host cell cytoplasm
AK	0042025	cellular_component	host cell nucleus
AK	0042802	molecular_function	identical protein binding
AK	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AK	0044177	cellular_component	host cell Golgi apparatus
AK	0044423	cellular_component	virion component
AK	1990904	cellular_component	ribonucleoprotein complex
AL	0003723	molecular_function	RNA binding
AL	0019013	cellular_component	viral nucleocapsid
AL	0019028	cellular_component	viral capsid
AL	0030430	cellular_component	host cell cytoplasm
AL	0042025	cellular_component	host cell nucleus
AL	0042802	molecular_function	identical protein binding
AL	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AL	0044177	cellular_component	host cell Golgi apparatus
AL	0044423	cellular_component	virion component
AL	1990904	cellular_component	ribonucleoprotein complex
AM	0003723	molecular_function	RNA binding
AM	0019013	cellular_component	viral nucleocapsid
AM	0019028	cellular_component	viral capsid
AM	0030430	cellular_component	host cell cytoplasm
AM	0042025	cellular_component	host cell nucleus
AM	0042802	molecular_function	identical protein binding
AM	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AM	0044177	cellular_component	host cell Golgi apparatus
AM	0044423	cellular_component	virion component
AM	1990904	cellular_component	ribonucleoprotein complex
AN	0003723	molecular_function	RNA binding
AN	0019013	cellular_component	viral nucleocapsid
AN	0019028	cellular_component	viral capsid
AN	0030430	cellular_component	host cell cytoplasm
AN	0042025	cellular_component	host cell nucleus
AN	0042802	molecular_function	identical protein binding
AN	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AN	0044177	cellular_component	host cell Golgi apparatus
AN	0044423	cellular_component	virion component
AN	1990904	cellular_component	ribonucleoprotein complex
AO	0003723	molecular_function	RNA binding
AO	0019013	cellular_component	viral nucleocapsid
AO	0019028	cellular_component	viral capsid
AO	0030430	cellular_component	host cell cytoplasm
AO	0042025	cellular_component	host cell nucleus
AO	0042802	molecular_function	identical protein binding
AO	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AO	0044177	cellular_component	host cell Golgi apparatus
AO	0044423	cellular_component	virion component
AO	1990904	cellular_component	ribonucleoprotein complex
AP	0003723	molecular_function	RNA binding
AP	0019013	cellular_component	viral nucleocapsid
AP	0019028	cellular_component	viral capsid
AP	0030430	cellular_component	host cell cytoplasm
AP	0042025	cellular_component	host cell nucleus
AP	0042802	molecular_function	identical protein binding
AP	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AP	0044177	cellular_component	host cell Golgi apparatus
AP	0044423	cellular_component	virion component
AP	1990904	cellular_component	ribonucleoprotein complex
AQ	0003723	molecular_function	RNA binding
AQ	0019013	cellular_component	viral nucleocapsid
AQ	0019028	cellular_component	viral capsid
AQ	0030430	cellular_component	host cell cytoplasm
AQ	0042025	cellular_component	host cell nucleus
AQ	0042802	molecular_function	identical protein binding
AQ	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AQ	0044177	cellular_component	host cell Golgi apparatus
AQ	0044423	cellular_component	virion component
AQ	1990904	cellular_component	ribonucleoprotein complex
AR	0003723	molecular_function	RNA binding
AR	0019013	cellular_component	viral nucleocapsid
AR	0019028	cellular_component	viral capsid
AR	0030430	cellular_component	host cell cytoplasm
AR	0042025	cellular_component	host cell nucleus
AR	0042802	molecular_function	identical protein binding
AR	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
AR	0044177	cellular_component	host cell Golgi apparatus
AR	0044423	cellular_component	virion component
AR	1990904	cellular_component	ribonucleoprotein complex
BA	0003723	molecular_function	RNA binding
BA	0019013	cellular_component	viral nucleocapsid
BA	0019028	cellular_component	viral capsid
BA	0030430	cellular_component	host cell cytoplasm
BA	0042025	cellular_component	host cell nucleus
BA	0042802	molecular_function	identical protein binding
BA	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BA	0044177	cellular_component	host cell Golgi apparatus
BA	0044423	cellular_component	virion component
BA	1990904	cellular_component	ribonucleoprotein complex
BB	0003723	molecular_function	RNA binding
BB	0019013	cellular_component	viral nucleocapsid
BB	0019028	cellular_component	viral capsid
BB	0030430	cellular_component	host cell cytoplasm
BB	0042025	cellular_component	host cell nucleus
BB	0042802	molecular_function	identical protein binding
BB	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BB	0044177	cellular_component	host cell Golgi apparatus
BB	0044423	cellular_component	virion component
BB	1990904	cellular_component	ribonucleoprotein complex
BC	0003723	molecular_function	RNA binding
BC	0019013	cellular_component	viral nucleocapsid
BC	0019028	cellular_component	viral capsid
BC	0030430	cellular_component	host cell cytoplasm
BC	0042025	cellular_component	host cell nucleus
BC	0042802	molecular_function	identical protein binding
BC	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BC	0044177	cellular_component	host cell Golgi apparatus
BC	0044423	cellular_component	virion component
BC	1990904	cellular_component	ribonucleoprotein complex
BD	0003723	molecular_function	RNA binding
BD	0019013	cellular_component	viral nucleocapsid
BD	0019028	cellular_component	viral capsid
BD	0030430	cellular_component	host cell cytoplasm
BD	0042025	cellular_component	host cell nucleus
BD	0042802	molecular_function	identical protein binding
BD	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BD	0044177	cellular_component	host cell Golgi apparatus
BD	0044423	cellular_component	virion component
BD	1990904	cellular_component	ribonucleoprotein complex
BE	0003723	molecular_function	RNA binding
BE	0019013	cellular_component	viral nucleocapsid
BE	0019028	cellular_component	viral capsid
BE	0030430	cellular_component	host cell cytoplasm
BE	0042025	cellular_component	host cell nucleus
BE	0042802	molecular_function	identical protein binding
BE	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BE	0044177	cellular_component	host cell Golgi apparatus
BE	0044423	cellular_component	virion component
BE	1990904	cellular_component	ribonucleoprotein complex
BF	0003723	molecular_function	RNA binding
BF	0019013	cellular_component	viral nucleocapsid
BF	0019028	cellular_component	viral capsid
BF	0030430	cellular_component	host cell cytoplasm
BF	0042025	cellular_component	host cell nucleus
BF	0042802	molecular_function	identical protein binding
BF	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BF	0044177	cellular_component	host cell Golgi apparatus
BF	0044423	cellular_component	virion component
BF	1990904	cellular_component	ribonucleoprotein complex
BG	0003723	molecular_function	RNA binding
BG	0019013	cellular_component	viral nucleocapsid
BG	0019028	cellular_component	viral capsid
BG	0030430	cellular_component	host cell cytoplasm
BG	0042025	cellular_component	host cell nucleus
BG	0042802	molecular_function	identical protein binding
BG	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BG	0044177	cellular_component	host cell Golgi apparatus
BG	0044423	cellular_component	virion component
BG	1990904	cellular_component	ribonucleoprotein complex
BH	0003723	molecular_function	RNA binding
BH	0019013	cellular_component	viral nucleocapsid
BH	0019028	cellular_component	viral capsid
BH	0030430	cellular_component	host cell cytoplasm
BH	0042025	cellular_component	host cell nucleus
BH	0042802	molecular_function	identical protein binding
BH	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BH	0044177	cellular_component	host cell Golgi apparatus
BH	0044423	cellular_component	virion component
BH	1990904	cellular_component	ribonucleoprotein complex
BI	0003723	molecular_function	RNA binding
BI	0019013	cellular_component	viral nucleocapsid
BI	0019028	cellular_component	viral capsid
BI	0030430	cellular_component	host cell cytoplasm
BI	0042025	cellular_component	host cell nucleus
BI	0042802	molecular_function	identical protein binding
BI	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BI	0044177	cellular_component	host cell Golgi apparatus
BI	0044423	cellular_component	virion component
BI	1990904	cellular_component	ribonucleoprotein complex
BJ	0003723	molecular_function	RNA binding
BJ	0019013	cellular_component	viral nucleocapsid
BJ	0019028	cellular_component	viral capsid
BJ	0030430	cellular_component	host cell cytoplasm
BJ	0042025	cellular_component	host cell nucleus
BJ	0042802	molecular_function	identical protein binding
BJ	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BJ	0044177	cellular_component	host cell Golgi apparatus
BJ	0044423	cellular_component	virion component
BJ	1990904	cellular_component	ribonucleoprotein complex
BK	0003723	molecular_function	RNA binding
BK	0019013	cellular_component	viral nucleocapsid
BK	0019028	cellular_component	viral capsid
BK	0030430	cellular_component	host cell cytoplasm
BK	0042025	cellular_component	host cell nucleus
BK	0042802	molecular_function	identical protein binding
BK	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BK	0044177	cellular_component	host cell Golgi apparatus
BK	0044423	cellular_component	virion component
BK	1990904	cellular_component	ribonucleoprotein complex
BL	0003723	molecular_function	RNA binding
BL	0019013	cellular_component	viral nucleocapsid
BL	0019028	cellular_component	viral capsid
BL	0030430	cellular_component	host cell cytoplasm
BL	0042025	cellular_component	host cell nucleus
BL	0042802	molecular_function	identical protein binding
BL	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BL	0044177	cellular_component	host cell Golgi apparatus
BL	0044423	cellular_component	virion component
BL	1990904	cellular_component	ribonucleoprotein complex
BM	0003723	molecular_function	RNA binding
BM	0019013	cellular_component	viral nucleocapsid
BM	0019028	cellular_component	viral capsid
BM	0030430	cellular_component	host cell cytoplasm
BM	0042025	cellular_component	host cell nucleus
BM	0042802	molecular_function	identical protein binding
BM	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BM	0044177	cellular_component	host cell Golgi apparatus
BM	0044423	cellular_component	virion component
BM	1990904	cellular_component	ribonucleoprotein complex
BN	0003723	molecular_function	RNA binding
BN	0019013	cellular_component	viral nucleocapsid
BN	0019028	cellular_component	viral capsid
BN	0030430	cellular_component	host cell cytoplasm
BN	0042025	cellular_component	host cell nucleus
BN	0042802	molecular_function	identical protein binding
BN	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BN	0044177	cellular_component	host cell Golgi apparatus
BN	0044423	cellular_component	virion component
BN	1990904	cellular_component	ribonucleoprotein complex
BO	0003723	molecular_function	RNA binding
BO	0019013	cellular_component	viral nucleocapsid
BO	0019028	cellular_component	viral capsid
BO	0030430	cellular_component	host cell cytoplasm
BO	0042025	cellular_component	host cell nucleus
BO	0042802	molecular_function	identical protein binding
BO	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BO	0044177	cellular_component	host cell Golgi apparatus
BO	0044423	cellular_component	virion component
BO	1990904	cellular_component	ribonucleoprotein complex
BP	0003723	molecular_function	RNA binding
BP	0019013	cellular_component	viral nucleocapsid
BP	0019028	cellular_component	viral capsid
BP	0030430	cellular_component	host cell cytoplasm
BP	0042025	cellular_component	host cell nucleus
BP	0042802	molecular_function	identical protein binding
BP	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BP	0044177	cellular_component	host cell Golgi apparatus
BP	0044423	cellular_component	virion component
BP	1990904	cellular_component	ribonucleoprotein complex
BQ	0003723	molecular_function	RNA binding
BQ	0019013	cellular_component	viral nucleocapsid
BQ	0019028	cellular_component	viral capsid
BQ	0030430	cellular_component	host cell cytoplasm
BQ	0042025	cellular_component	host cell nucleus
BQ	0042802	molecular_function	identical protein binding
BQ	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BQ	0044177	cellular_component	host cell Golgi apparatus
BQ	0044423	cellular_component	virion component
BQ	1990904	cellular_component	ribonucleoprotein complex
BR	0003723	molecular_function	RNA binding
BR	0019013	cellular_component	viral nucleocapsid
BR	0019028	cellular_component	viral capsid
BR	0030430	cellular_component	host cell cytoplasm
BR	0042025	cellular_component	host cell nucleus
BR	0042802	molecular_function	identical protein binding
BR	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
BR	0044177	cellular_component	host cell Golgi apparatus
BR	0044423	cellular_component	virion component
BR	1990904	cellular_component	ribonucleoprotein complex

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	252
Details	Binding site: {"evidences":[{"source":"PubMed","id":"23129612","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	108
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P21701","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	36
Details	Site: {"description":"Important for dimerization","evidences":[{"source":"PubMed","id":"20547879","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---