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4V89

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AB0000028biological_processribosomal small subunit assembly
AB0002181biological_processcytoplasmic translation
AB0003735molecular_functionstructural constituent of ribosome
AB0005515molecular_functionprotein binding
AB0005737cellular_componentcytoplasm
AB0005840cellular_componentribosome
AB0006412biological_processtranslation
AB0008270molecular_functionzinc ion binding
AB0015935cellular_componentsmall ribosomal subunit
AB0022627cellular_componentcytosolic small ribosomal subunit
AB1990904cellular_componentribonucleoprotein complex
AC0000028biological_processribosomal small subunit assembly
AC0002181biological_processcytoplasmic translation
AC0003676molecular_functionnucleic acid binding
AC0003723molecular_functionRNA binding
AC0003729molecular_functionmRNA binding
AC0003735molecular_functionstructural constituent of ribosome
AC0005737cellular_componentcytoplasm
AC0005829cellular_componentcytosol
AC0005840cellular_componentribosome
AC0006412biological_processtranslation
AC0019843molecular_functionrRNA binding
AC0022627cellular_componentcytosolic small ribosomal subunit
AC1990904cellular_componentribonucleoprotein complex
AD0000028biological_processribosomal small subunit assembly
AD0000900molecular_functionmRNA regulatory element binding translation repressor activity
AD0002181biological_processcytoplasmic translation
AD0003723molecular_functionRNA binding
AD0003735molecular_functionstructural constituent of ribosome
AD0005515molecular_functionprotein binding
AD0005737cellular_componentcytoplasm
AD0005829cellular_componentcytosol
AD0005840cellular_componentribosome
AD0006353biological_processDNA-templated transcription termination
AD0006412biological_processtranslation
AD0006417biological_processregulation of translation
AD0015935cellular_componentsmall ribosomal subunit
AD0019843molecular_functionrRNA binding
AD0022627cellular_componentcytosolic small ribosomal subunit
AD0031564biological_processtranscription antitermination
AD0042254biological_processribosome biogenesis
AD0042274biological_processribosomal small subunit biogenesis
AD0045947biological_processnegative regulation of translational initiation
AD0046677biological_processresponse to antibiotic
AD0048027molecular_functionmRNA 5'-UTR binding
AD1990145biological_processmaintenance of translational fidelity
AD1990904cellular_componentribonucleoprotein complex
AE0000028biological_processribosomal small subunit assembly
AE0002181biological_processcytoplasmic translation
AE0003723molecular_functionRNA binding
AE0003735molecular_functionstructural constituent of ribosome
AE0005515molecular_functionprotein binding
AE0005737cellular_componentcytoplasm
AE0005829cellular_componentcytosol
AE0005840cellular_componentribosome
AE0006412biological_processtranslation
AE0015935cellular_componentsmall ribosomal subunit
AE0019843molecular_functionrRNA binding
AE0022627cellular_componentcytosolic small ribosomal subunit
AE0043229cellular_componentintracellular organelle
AE0046677biological_processresponse to antibiotic
AE1990145biological_processmaintenance of translational fidelity
AE1990904cellular_componentribonucleoprotein complex
AF0002181biological_processcytoplasmic translation
AF0003735molecular_functionstructural constituent of ribosome
AF0005515molecular_functionprotein binding
AF0005737cellular_componentcytoplasm
AF0005829cellular_componentcytosol
AF0005840cellular_componentribosome
AF0006412biological_processtranslation
AF0019843molecular_functionrRNA binding
AF0022627cellular_componentcytosolic small ribosomal subunit
AF0043229cellular_componentintracellular organelle
AF0048027molecular_functionmRNA 5'-UTR binding
AF0070181molecular_functionsmall ribosomal subunit rRNA binding
AF1990904cellular_componentribonucleoprotein complex
AG0000028biological_processribosomal small subunit assembly
AG0000049molecular_functiontRNA binding
AG0002181biological_processcytoplasmic translation
AG0003723molecular_functionRNA binding
AG0003729molecular_functionmRNA binding
AG0003735molecular_functionstructural constituent of ribosome
AG0005515molecular_functionprotein binding
AG0005737cellular_componentcytoplasm
AG0005829cellular_componentcytosol
AG0005840cellular_componentribosome
AG0006412biological_processtranslation
AG0015935cellular_componentsmall ribosomal subunit
AG0016020cellular_componentmembrane
AG0017148biological_processnegative regulation of translation
AG0019843molecular_functionrRNA binding
AG0022627cellular_componentcytosolic small ribosomal subunit
AG1990904cellular_componentribonucleoprotein complex
AH0000028biological_processribosomal small subunit assembly
AH0002181biological_processcytoplasmic translation
AH0003735molecular_functionstructural constituent of ribosome
AH0005737cellular_componentcytoplasm
AH0005829cellular_componentcytosol
AH0005840cellular_componentribosome
AH0006412biological_processtranslation
AH0006417biological_processregulation of translation
AH0019843molecular_functionrRNA binding
AH0022627cellular_componentcytosolic small ribosomal subunit
AH0043229cellular_componentintracellular organelle
AH0043488biological_processregulation of mRNA stability
AH1990904cellular_componentribonucleoprotein complex
AI0000049molecular_functiontRNA binding
AI0002181biological_processcytoplasmic translation
AI0003723molecular_functionRNA binding
AI0003735molecular_functionstructural constituent of ribosome
AI0005737cellular_componentcytoplasm
AI0005829cellular_componentcytosol
AI0005840cellular_componentribosome
AI0006412biological_processtranslation
AI0022627cellular_componentcytosolic small ribosomal subunit
AI0043229cellular_componentintracellular organelle
AI1990904cellular_componentribonucleoprotein complex
AJ0000049molecular_functiontRNA binding
AJ0001072molecular_functiontranscription antitermination factor activity, RNA binding
AJ0002181biological_processcytoplasmic translation
AJ0003723molecular_functionRNA binding
AJ0003735molecular_functionstructural constituent of ribosome
AJ0005515molecular_functionprotein binding
AJ0005737cellular_componentcytoplasm
AJ0005829cellular_componentcytosol
AJ0005840cellular_componentribosome
AJ0006412biological_processtranslation
AJ0008023cellular_componenttranscription elongation factor complex
AJ0015935cellular_componentsmall ribosomal subunit
AJ0022627cellular_componentcytosolic small ribosomal subunit
AJ0031564biological_processtranscription antitermination
AJ0032784biological_processregulation of DNA-templated transcription elongation
AJ0042254biological_processribosome biogenesis
AJ1990904cellular_componentribonucleoprotein complex
AK0002181biological_processcytoplasmic translation
AK0003735molecular_functionstructural constituent of ribosome
AK0005515molecular_functionprotein binding
AK0005737cellular_componentcytoplasm
AK0005829cellular_componentcytosol
AK0005840cellular_componentribosome
AK0006412biological_processtranslation
AK0019843molecular_functionrRNA binding
AK0022627cellular_componentcytosolic small ribosomal subunit
AK0070181molecular_functionsmall ribosomal subunit rRNA binding
AK1990904cellular_componentribonucleoprotein complex
AL0000049molecular_functiontRNA binding
AL0000372biological_processGroup I intron splicing
AL0002181biological_processcytoplasmic translation
AL0003735molecular_functionstructural constituent of ribosome
AL0005515molecular_functionprotein binding
AL0005737cellular_componentcytoplasm
AL0005829cellular_componentcytosol
AL0005840cellular_componentribosome
AL0006412biological_processtranslation
AL0015935cellular_componentsmall ribosomal subunit
AL0019843molecular_functionrRNA binding
AL0022627cellular_componentcytosolic small ribosomal subunit
AL0033120biological_processpositive regulation of RNA splicing
AL0034336molecular_functionmisfolded RNA binding
AL0034337biological_processRNA folding
AL0046677biological_processresponse to antibiotic
AL1990145biological_processmaintenance of translational fidelity
AL1990904cellular_componentribonucleoprotein complex
AM0000049molecular_functiontRNA binding
AM0002181biological_processcytoplasmic translation
AM0003676molecular_functionnucleic acid binding
AM0003723molecular_functionRNA binding
AM0003735molecular_functionstructural constituent of ribosome
AM0005515molecular_functionprotein binding
AM0005737cellular_componentcytoplasm
AM0005829cellular_componentcytosol
AM0005840cellular_componentribosome
AM0006412biological_processtranslation
AM0015935cellular_componentsmall ribosomal subunit
AM0019843molecular_functionrRNA binding
AM0022627cellular_componentcytosolic small ribosomal subunit
AM1990904cellular_componentribonucleoprotein complex
AN0000028biological_processribosomal small subunit assembly
AN0000049molecular_functiontRNA binding
AN0002181biological_processcytoplasmic translation
AN0003735molecular_functionstructural constituent of ribosome
AN0005737cellular_componentcytoplasm
AN0005840cellular_componentribosome
AN0006412biological_processtranslation
AN0015935cellular_componentsmall ribosomal subunit
AN0019843molecular_functionrRNA binding
AN0022627cellular_componentcytosolic small ribosomal subunit
AN0043229cellular_componentintracellular organelle
AN1990904cellular_componentribonucleoprotein complex
AO0000028biological_processribosomal small subunit assembly
AO0002181biological_processcytoplasmic translation
AO0003735molecular_functionstructural constituent of ribosome
AO0005737cellular_componentcytoplasm
AO0005829cellular_componentcytosol
AO0005840cellular_componentribosome
AO0006412biological_processtranslation
AO0006417biological_processregulation of translation
AO0019843molecular_functionrRNA binding
AO0022627cellular_componentcytosolic small ribosomal subunit
AO0043229cellular_componentintracellular organelle
AO0070181molecular_functionsmall ribosomal subunit rRNA binding
AO1990904cellular_componentribonucleoprotein complex
AP0000028biological_processribosomal small subunit assembly
AP0000400molecular_functionfour-way junction DNA binding
AP0002181biological_processcytoplasmic translation
AP0003735molecular_functionstructural constituent of ribosome
AP0004519molecular_functionendonuclease activity
AP0004520molecular_functionDNA endonuclease activity
AP0005737cellular_componentcytoplasm
AP0005840cellular_componentribosome
AP0006259biological_processDNA metabolic process
AP0006412biological_processtranslation
AP0015935cellular_componentsmall ribosomal subunit
AP0022627cellular_componentcytosolic small ribosomal subunit
AP0043229cellular_componentintracellular organelle
AP1990904cellular_componentribonucleoprotein complex
AQ0000028biological_processribosomal small subunit assembly
AQ0002181biological_processcytoplasmic translation
AQ0003735molecular_functionstructural constituent of ribosome
AQ0005737cellular_componentcytoplasm
AQ0005840cellular_componentribosome
AQ0006412biological_processtranslation
AQ0008270molecular_functionzinc ion binding
AQ0019843molecular_functionrRNA binding
AQ0022627cellular_componentcytosolic small ribosomal subunit
AQ0046677biological_processresponse to antibiotic
AQ0060090molecular_functionmolecular adaptor activity
AQ0070181molecular_functionsmall ribosomal subunit rRNA binding
AQ1990904cellular_componentribonucleoprotein complex
AR0002181biological_processcytoplasmic translation
AR0003735molecular_functionstructural constituent of ribosome
AR0005515molecular_functionprotein binding
AR0005737cellular_componentcytoplasm
AR0005829cellular_componentcytosol
AR0005840cellular_componentribosome
AR0006412biological_processtranslation
AR0019843molecular_functionrRNA binding
AR0022627cellular_componentcytosolic small ribosomal subunit
AR0048027molecular_functionmRNA 5'-UTR binding
AR0070181molecular_functionsmall ribosomal subunit rRNA binding
AR1990904cellular_componentribonucleoprotein complex
AS0000028biological_processribosomal small subunit assembly
AS0000049molecular_functiontRNA binding
AS0002181biological_processcytoplasmic translation
AS0003723molecular_functionRNA binding
AS0003735molecular_functionstructural constituent of ribosome
AS0005737cellular_componentcytoplasm
AS0005829cellular_componentcytosol
AS0005840cellular_componentribosome
AS0006412biological_processtranslation
AS0015935cellular_componentsmall ribosomal subunit
AS0019843molecular_functionrRNA binding
AS0022627cellular_componentcytosolic small ribosomal subunit
AS0043229cellular_componentintracellular organelle
AS1990904cellular_componentribonucleoprotein complex
AT0000028biological_processribosomal small subunit assembly
AT0002181biological_processcytoplasmic translation
AT0003723molecular_functionRNA binding
AT0003735molecular_functionstructural constituent of ribosome
AT0005737cellular_componentcytoplasm
AT0005829cellular_componentcytosol
AT0005840cellular_componentribosome
AT0006412biological_processtranslation
AT0008073molecular_functionornithine decarboxylase inhibitor activity
AT0015935cellular_componentsmall ribosomal subunit
AT0019843molecular_functionrRNA binding
AT0022627cellular_componentcytosolic small ribosomal subunit
AT0070181molecular_functionsmall ribosomal subunit rRNA binding
AT1990904cellular_componentribonucleoprotein complex
AU0000028biological_processribosomal small subunit assembly
AU0002181biological_processcytoplasmic translation
AU0003735molecular_functionstructural constituent of ribosome
AU0005737cellular_componentcytoplasm
AU0005829cellular_componentcytosol
AU0005840cellular_componentribosome
AU0006412biological_processtranslation
AU0019843molecular_functionrRNA binding
AU0022627cellular_componentcytosolic small ribosomal subunit
AU1990904cellular_componentribonucleoprotein complex
AW0003924molecular_functionGTPase activity
AW0005515molecular_functionprotein binding
AW0005525molecular_functionGTP binding
AW0005737cellular_componentcytoplasm
AW0005829cellular_componentcytosol
AW0006412biological_processtranslation
AW0006415biological_processtranslational termination
AW0006449biological_processregulation of translational termination
AW0016149molecular_functiontranslation release factor activity, codon specific
AW0016150molecular_functiontranslation release factor activity, codon nonspecific
AW0019003molecular_functionGDP binding
AW0097216molecular_functionguanosine tetraphosphate binding
AW1990145biological_processmaintenance of translational fidelity
B00000027biological_processribosomal large subunit assembly
B00000049molecular_functiontRNA binding
B00001558biological_processregulation of cell growth
B00002181biological_processcytoplasmic translation
B00003735molecular_functionstructural constituent of ribosome
B00005515molecular_functionprotein binding
B00005737cellular_componentcytoplasm
B00005840cellular_componentribosome
B00006412biological_processtranslation
B00019843molecular_functionrRNA binding
B00022625cellular_componentcytosolic large ribosomal subunit
B00042256biological_processcytosolic ribosome assembly
B00043022molecular_functionribosome binding
B00090070biological_processpositive regulation of ribosome biogenesis
B01902626biological_processassembly of large subunit precursor of preribosome
B01990904cellular_componentribonucleoprotein complex
B10000027biological_processribosomal large subunit assembly
B10002181biological_processcytoplasmic translation
B10003735molecular_functionstructural constituent of ribosome
B10005515molecular_functionprotein binding
B10005737cellular_componentcytoplasm
B10005829cellular_componentcytosol
B10005840cellular_componentribosome
B10006412biological_processtranslation
B10019843molecular_functionrRNA binding
B10022625cellular_componentcytosolic large ribosomal subunit
B11990904cellular_componentribonucleoprotein complex
B20000027biological_processribosomal large subunit assembly
B20002181biological_processcytoplasmic translation
B20003735molecular_functionstructural constituent of ribosome
B20005737cellular_componentcytoplasm
B20005840cellular_componentribosome
B20006412biological_processtranslation
B20019843molecular_functionrRNA binding
B20022625cellular_componentcytosolic large ribosomal subunit
B21990904cellular_componentribonucleoprotein complex
B30000027biological_processribosomal large subunit assembly
B30002181biological_processcytoplasmic translation
B30003735molecular_functionstructural constituent of ribosome
B30005737cellular_componentcytoplasm
B30005840cellular_componentribosome
B30006412biological_processtranslation
B30015934cellular_componentlarge ribosomal subunit
B30022625cellular_componentcytosolic large ribosomal subunit
B31990904cellular_componentribonucleoprotein complex
B40000027biological_processribosomal large subunit assembly
B40000302biological_processresponse to reactive oxygen species
B40002181biological_processcytoplasmic translation
B40003735molecular_functionstructural constituent of ribosome
B40005515molecular_functionprotein binding
B40005737cellular_componentcytoplasm
B40005829cellular_componentcytosol
B40005840cellular_componentribosome
B40006412biological_processtranslation
B40009314biological_processresponse to radiation
B40015934cellular_componentlarge ribosomal subunit
B40022625cellular_componentcytosolic large ribosomal subunit
B41990904cellular_componentribonucleoprotein complex
B50000027biological_processribosomal large subunit assembly
B50000049molecular_functiontRNA binding
B50002181biological_processcytoplasmic translation
B50003735molecular_functionstructural constituent of ribosome
B50005737cellular_componentcytoplasm
B50005829cellular_componentcytosol
B50005840cellular_componentribosome
B50006412biological_processtranslation
B50022625cellular_componentcytosolic large ribosomal subunit
B50043229cellular_componentintracellular organelle
B50046677biological_processresponse to antibiotic
B51990904cellular_componentribonucleoprotein complex
B60002181biological_processcytoplasmic translation
B60003735molecular_functionstructural constituent of ribosome
B60005515molecular_functionprotein binding
B60005737cellular_componentcytoplasm
B60005840cellular_componentribosome
B60006412biological_processtranslation
B60022625cellular_componentcytosolic large ribosomal subunit
B61990904cellular_componentribonucleoprotein complex
B70002181biological_processcytoplasmic translation
B70003735molecular_functionstructural constituent of ribosome
B70005737cellular_componentcytoplasm
B70005840cellular_componentribosome
B70006412biological_processtranslation
B70022625cellular_componentcytosolic large ribosomal subunit
B71990904cellular_componentribonucleoprotein complex
B80002181biological_processcytoplasmic translation
B80003735molecular_functionstructural constituent of ribosome
B80005737cellular_componentcytoplasm
B80005840cellular_componentribosome
B80006412biological_processtranslation
B80022625cellular_componentcytosolic large ribosomal subunit
B80043229cellular_componentintracellular organelle
B81990904cellular_componentribonucleoprotein complex
BC0000027biological_processribosomal large subunit assembly
BC0002181biological_processcytoplasmic translation
BC0003723molecular_functionRNA binding
BC0003735molecular_functionstructural constituent of ribosome
BC0005515molecular_functionprotein binding
BC0005737cellular_componentcytoplasm
BC0005829cellular_componentcytosol
BC0005840cellular_componentribosome
BC0006412biological_processtranslation
BC0008270molecular_functionzinc ion binding
BC0015934cellular_componentlarge ribosomal subunit
BC0016740molecular_functiontransferase activity
BC0019843molecular_functionrRNA binding
BC0022625cellular_componentcytosolic large ribosomal subunit
BC0032297biological_processnegative regulation of DNA-templated DNA replication initiation
BC1990082cellular_componentDnaA-L2 complex
BC1990904cellular_componentribonucleoprotein complex
BD0000027biological_processribosomal large subunit assembly
BD0002181biological_processcytoplasmic translation
BD0003735molecular_functionstructural constituent of ribosome
BD0005515molecular_functionprotein binding
BD0005737cellular_componentcytoplasm
BD0005829cellular_componentcytosol
BD0005840cellular_componentribosome
BD0006412biological_processtranslation
BD0019843molecular_functionrRNA binding
BD0022625cellular_componentcytosolic large ribosomal subunit
BD1990904cellular_componentribonucleoprotein complex
BE0001070molecular_functionRNA-binding transcription regulator activity
BE0002181biological_processcytoplasmic translation
BE0003677molecular_functionDNA binding
BE0003735molecular_functionstructural constituent of ribosome
BE0005515molecular_functionprotein binding
BE0005737cellular_componentcytoplasm
BE0005829cellular_componentcytosol
BE0005840cellular_componentribosome
BE0006353biological_processDNA-templated transcription termination
BE0006412biological_processtranslation
BE0006417biological_processregulation of translation
BE0015934cellular_componentlarge ribosomal subunit
BE0017148biological_processnegative regulation of translation
BE0019843molecular_functionrRNA binding
BE0022625cellular_componentcytosolic large ribosomal subunit
BE0030371molecular_functiontranslation repressor activity
BE0031555biological_processtranscriptional attenuation
BE0042255biological_processribosome assembly
BE0045892biological_processnegative regulation of DNA-templated transcription
BE0046677biological_processresponse to antibiotic
BE0048027molecular_functionmRNA 5'-UTR binding
BE0060698molecular_functionendoribonuclease inhibitor activity
BE1990904cellular_componentribonucleoprotein complex
BE2000766biological_processnegative regulation of cytoplasmic translation
BF0000027biological_processribosomal large subunit assembly
BF0000049molecular_functiontRNA binding
BF0002181biological_processcytoplasmic translation
BF0003723molecular_functionRNA binding
BF0003735molecular_functionstructural constituent of ribosome
BF0005737cellular_componentcytoplasm
BF0005829cellular_componentcytosol
BF0005840cellular_componentribosome
BF0006412biological_processtranslation
BF0008097molecular_function5S rRNA binding
BF0019843molecular_functionrRNA binding
BF0022625cellular_componentcytosolic large ribosomal subunit
BF1990904cellular_componentribonucleoprotein complex
BG0000027biological_processribosomal large subunit assembly
BG0002181biological_processcytoplasmic translation
BG0003735molecular_functionstructural constituent of ribosome
BG0005737cellular_componentcytoplasm
BG0005829cellular_componentcytosol
BG0005840cellular_componentribosome
BG0006412biological_processtranslation
BG0019843molecular_functionrRNA binding
BG0022625cellular_componentcytosolic large ribosomal subunit
BG0046677biological_processresponse to antibiotic
BG0070180molecular_functionlarge ribosomal subunit rRNA binding
BG1990904cellular_componentribonucleoprotein complex
BH0002181biological_processcytoplasmic translation
BH0003735molecular_functionstructural constituent of ribosome
BH0003924molecular_functionGTPase activity
BH0005515molecular_functionprotein binding
BH0005737cellular_componentcytoplasm
BH0005829cellular_componentcytosol
BH0005840cellular_componentribosome
BH0006412biological_processtranslation
BH0006417biological_processregulation of translation
BH0015934cellular_componentlarge ribosomal subunit
BH0017148biological_processnegative regulation of translation
BH0019843molecular_functionrRNA binding
BH0022625cellular_componentcytosolic large ribosomal subunit
BH0043022molecular_functionribosome binding
BH0070180molecular_functionlarge ribosomal subunit rRNA binding
BH1990904cellular_componentribonucleoprotein complex
BI0000027biological_processribosomal large subunit assembly
BI0002181biological_processcytoplasmic translation
BI0003735molecular_functionstructural constituent of ribosome
BI0005515molecular_functionprotein binding
BI0005737cellular_componentcytoplasm
BI0005829cellular_componentcytosol
BI0005840cellular_componentribosome
BI0006412biological_processtranslation
BI0006415biological_processtranslational termination
BI0015968biological_processstringent response
BI0019843molecular_functionrRNA binding
BI0022625cellular_componentcytosolic large ribosomal subunit
BI0070180molecular_functionlarge ribosomal subunit rRNA binding
BI1990904cellular_componentribonucleoprotein complex
BJ0002181biological_processcytoplasmic translation
BJ0003729molecular_functionmRNA binding
BJ0003735molecular_functionstructural constituent of ribosome
BJ0003924molecular_functionGTPase activity
BJ0005515molecular_functionprotein binding
BJ0005737cellular_componentcytoplasm
BJ0005829cellular_componentcytosol
BJ0005840cellular_componentribosome
BJ0006412biological_processtranslation
BJ0015934cellular_componentlarge ribosomal subunit
BJ0022625cellular_componentcytosolic large ribosomal subunit
BJ0042803molecular_functionprotein homodimerization activity
BJ0043022molecular_functionribosome binding
BJ1990904cellular_componentribonucleoprotein complex
BK0002181biological_processcytoplasmic translation
BK0003729molecular_functionmRNA binding
BK0003735molecular_functionstructural constituent of ribosome
BK0003924molecular_functionGTPase activity
BK0005515molecular_functionprotein binding
BK0005737cellular_componentcytoplasm
BK0005829cellular_componentcytosol
BK0005840cellular_componentribosome
BK0006412biological_processtranslation
BK0015934cellular_componentlarge ribosomal subunit
BK0022625cellular_componentcytosolic large ribosomal subunit
BK0042803molecular_functionprotein homodimerization activity
BK0043022molecular_functionribosome binding
BK1990904cellular_componentribonucleoprotein complex
BL0002181biological_processcytoplasmic translation
BL0003729molecular_functionmRNA binding
BL0003735molecular_functionstructural constituent of ribosome
BL0003924molecular_functionGTPase activity
BL0005515molecular_functionprotein binding
BL0005737cellular_componentcytoplasm
BL0005829cellular_componentcytosol
BL0005840cellular_componentribosome
BL0006412biological_processtranslation
BL0015934cellular_componentlarge ribosomal subunit
BL0022625cellular_componentcytosolic large ribosomal subunit
BL0042803molecular_functionprotein homodimerization activity
BL0043022molecular_functionribosome binding
BL1990904cellular_componentribonucleoprotein complex
BM0002181biological_processcytoplasmic translation
BM0003729molecular_functionmRNA binding
BM0003735molecular_functionstructural constituent of ribosome
BM0003924molecular_functionGTPase activity
BM0005515molecular_functionprotein binding
BM0005737cellular_componentcytoplasm
BM0005829cellular_componentcytosol
BM0005840cellular_componentribosome
BM0006412biological_processtranslation
BM0015934cellular_componentlarge ribosomal subunit
BM0022625cellular_componentcytosolic large ribosomal subunit
BM0042803molecular_functionprotein homodimerization activity
BM0043022molecular_functionribosome binding
BM1990904cellular_componentribonucleoprotein complex
BN0002181biological_processcytoplasmic translation
BN0003729molecular_functionmRNA binding
BN0003735molecular_functionstructural constituent of ribosome
BN0005737cellular_componentcytoplasm
BN0005829cellular_componentcytosol
BN0005840cellular_componentribosome
BN0006412biological_processtranslation
BN0008270molecular_functionzinc ion binding
BN0017148biological_processnegative regulation of translation
BN0022625cellular_componentcytosolic large ribosomal subunit
BN0043229cellular_componentintracellular organelle
BN0048027molecular_functionmRNA 5'-UTR binding
BN0070180molecular_functionlarge ribosomal subunit rRNA binding
BN1990904cellular_componentribonucleoprotein complex
BO0002181biological_processcytoplasmic translation
BO0003735molecular_functionstructural constituent of ribosome
BO0005515molecular_functionprotein binding
BO0005737cellular_componentcytoplasm
BO0005829cellular_componentcytosol
BO0005840cellular_componentribosome
BO0006412biological_processtranslation
BO0015934cellular_componentlarge ribosomal subunit
BO0019843molecular_functionrRNA binding
BO0022625cellular_componentcytosolic large ribosomal subunit
BO0070180molecular_functionlarge ribosomal subunit rRNA binding
BO1990904cellular_componentribonucleoprotein complex
BP0002181biological_processcytoplasmic translation
BP0003735molecular_functionstructural constituent of ribosome
BP0005515molecular_functionprotein binding
BP0005737cellular_componentcytoplasm
BP0005840cellular_componentribosome
BP0006412biological_processtranslation
BP0015934cellular_componentlarge ribosomal subunit
BP0019843molecular_functionrRNA binding
BP0022625cellular_componentcytosolic large ribosomal subunit
BP1990904cellular_componentribonucleoprotein complex
BQ0000027biological_processribosomal large subunit assembly
BQ0000049molecular_functiontRNA binding
BQ0002181biological_processcytoplasmic translation
BQ0003735molecular_functionstructural constituent of ribosome
BQ0005737cellular_componentcytoplasm
BQ0005840cellular_componentribosome
BQ0006412biological_processtranslation
BQ0019843molecular_functionrRNA binding
BQ0022625cellular_componentcytosolic large ribosomal subunit
BQ1990904cellular_componentribonucleoprotein complex
BR0000027biological_processribosomal large subunit assembly
BR0002181biological_processcytoplasmic translation
BR0003735molecular_functionstructural constituent of ribosome
BR0005515molecular_functionprotein binding
BR0005737cellular_componentcytoplasm
BR0005829cellular_componentcytosol
BR0005840cellular_componentribosome
BR0006412biological_processtranslation
BR0022625cellular_componentcytosolic large ribosomal subunit
BR1990904cellular_componentribonucleoprotein complex
BS0002181biological_processcytoplasmic translation
BS0003735molecular_functionstructural constituent of ribosome
BS0005737cellular_componentcytoplasm
BS0005829cellular_componentcytosol
BS0005840cellular_componentribosome
BS0006412biological_processtranslation
BS0008097molecular_function5S rRNA binding
BS0019843molecular_functionrRNA binding
BS0022625cellular_componentcytosolic large ribosomal subunit
BS0043229cellular_componentintracellular organelle
BS1990904cellular_componentribonucleoprotein complex
BT0000027biological_processribosomal large subunit assembly
BT0002181biological_processcytoplasmic translation
BT0003735molecular_functionstructural constituent of ribosome
BT0005737cellular_componentcytoplasm
BT0005829cellular_componentcytosol
BT0005840cellular_componentribosome
BT0006412biological_processtranslation
BT0019843molecular_functionrRNA binding
BT0022625cellular_componentcytosolic large ribosomal subunit
BT0070180molecular_functionlarge ribosomal subunit rRNA binding
BT1990904cellular_componentribonucleoprotein complex
BU0000027biological_processribosomal large subunit assembly
BU0000900molecular_functionmRNA regulatory element binding translation repressor activity
BU0002181biological_processcytoplasmic translation
BU0003729molecular_functionmRNA binding
BU0003735molecular_functionstructural constituent of ribosome
BU0005737cellular_componentcytoplasm
BU0005829cellular_componentcytosol
BU0005840cellular_componentribosome
BU0006412biological_processtranslation
BU0017148biological_processnegative regulation of translation
BU0019843molecular_functionrRNA binding
BU0022625cellular_componentcytosolic large ribosomal subunit
BU0070180molecular_functionlarge ribosomal subunit rRNA binding
BU1990904cellular_componentribonucleoprotein complex
BV0002181biological_processcytoplasmic translation
BV0003723molecular_functionRNA binding
BV0003735molecular_functionstructural constituent of ribosome
BV0005737cellular_componentcytoplasm
BV0005829cellular_componentcytosol
BV0005840cellular_componentribosome
BV0006412biological_processtranslation
BV0019843molecular_functionrRNA binding
BV0022625cellular_componentcytosolic large ribosomal subunit
BV0043229cellular_componentintracellular organelle
BV1990904cellular_componentribonucleoprotein complex
BW0002181biological_processcytoplasmic translation
BW0003735molecular_functionstructural constituent of ribosome
BW0005515molecular_functionprotein binding
BW0005737cellular_componentcytoplasm
BW0005829cellular_componentcytosol
BW0005840cellular_componentribosome
BW0006412biological_processtranslation
BW0015934cellular_componentlarge ribosomal subunit
BW0019843molecular_functionrRNA binding
BW0022625cellular_componentcytosolic large ribosomal subunit
BW0042255biological_processribosome assembly
BW0042256biological_processcytosolic ribosome assembly
BW0046677biological_processresponse to antibiotic
BW0070180molecular_functionlarge ribosomal subunit rRNA binding
BW1902626biological_processassembly of large subunit precursor of preribosome
BW1990904cellular_componentribonucleoprotein complex
BX0000027biological_processribosomal large subunit assembly
BX0002181biological_processcytoplasmic translation
BX0003735molecular_functionstructural constituent of ribosome
BX0005515molecular_functionprotein binding
BX0005737cellular_componentcytoplasm
BX0005840cellular_componentribosome
BX0006412biological_processtranslation
BX0019843molecular_functionrRNA binding
BX0022625cellular_componentcytosolic large ribosomal subunit
BX1990904cellular_componentribonucleoprotein complex
BY0000027biological_processribosomal large subunit assembly
BY0002181biological_processcytoplasmic translation
BY0003723molecular_functionRNA binding
BY0003735molecular_functionstructural constituent of ribosome
BY0005515molecular_functionprotein binding
BY0005737cellular_componentcytoplasm
BY0005829cellular_componentcytosol
BY0005840cellular_componentribosome
BY0006412biological_processtranslation
BY0019843molecular_functionrRNA binding
BY0022625cellular_componentcytosolic large ribosomal subunit
BY0070180molecular_functionlarge ribosomal subunit rRNA binding
BY1990904cellular_componentribonucleoprotein complex
BZ0000027biological_processribosomal large subunit assembly
BZ0002181biological_processcytoplasmic translation
BZ0003723molecular_functionRNA binding
BZ0003735molecular_functionstructural constituent of ribosome
BZ0005737cellular_componentcytoplasm
BZ0005829cellular_componentcytosol
BZ0005840cellular_componentribosome
BZ0006412biological_processtranslation
BZ0008097molecular_function5S rRNA binding
BZ0009314biological_processresponse to radiation
BZ0017148biological_processnegative regulation of translation
BZ0019843molecular_functionrRNA binding
BZ0022625cellular_componentcytosolic large ribosomal subunit
BZ1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue GNP AW 601
ChainResidue
AWSER20
AWVAL46
AWILE68
AWSER69
AWGLY91
AWASN142
AWLYS143
AWASP145
AWARG146
AWTHR258
AWALA259
AWHIS21
AWLEU260
AWMG602
BAU2656
AWPRO22
AWASP23
AWALA24
AWGLY25
AWLYS26
AWTHR27
AWTHR28

site_idAC2
Number of Residues4
Detailsbinding site for residue MG AW 602
ChainResidue
AWTHR27
AWTRP59
AWSER69
AWGNP601

Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
BOALA60-LEU86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
BXLYS81-VAL96

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
AGSER19-ALA45

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
AHGLY99-ARG116

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
ChainResidueDetails
AKILE96-ASN118

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
ALLYS42-ARG49

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
AQGLY55-SER67

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
ARILE20-ILE43

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
AMPRO9-GLY37

site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DWmemEKqRGISIttS
ChainResidueDetails
AWASP58-SER73

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
ASASN52-THR76

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
BFLEU56-SER72

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
BIARG126-ASP141

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
AIGLY68-LEU86

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
AJALA29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
AOLEU38-TYR68

site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
BXMET1-LYS66

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
BWLYS83-VAL107

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
BCPRO217-ASP228

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
BDPHE101-ARG124

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
BPLYS109-GLY139

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
BGPRO153-VAL161

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
ANARG62-ARG84

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
ACALA162-GLY196

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
B2GLN39-VAL53

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
B5TYR20-ASP39

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
AEGLY27-ILE59

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
BQLYS58-PRO69

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
ADLEU93-VAL117

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
B3THR22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
AMARG86-GLN99

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
BQARG81-TRP92

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
APVAL2-ALA11

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
BNVAL105-GLY127

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
B6LYS2-ARG21

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
B8CYS11-GLN37

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
B0GLY33-GLY47

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
B7LYS4-HIS30

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
BULYS53-ARG69

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
ABMET5-GLY16

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
ABPRO157-PRO181

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
BTVAL85-ARG100

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
AFGLY43-ASN52

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
BYASP7-VAL24

site_idPS01109
Number of Residues35
DetailsRIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
ChainResidueDetails
BHLYS8-ARG42

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
BRILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
BVVAL72-THR94

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
AUASP12-LYS24

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:34403461, ECO:0000269|PubMed:34504068, ECO:0000312|PDB:7O19, ECO:0000312|PDB:7O1A, ECO:0000312|PDB:7O1C, ECO:0000312|PDB:7OIZ, ECO:0000312|PDB:7OJ0
ChainResidueDetails
BWLYS90
BKSER1
BLSER1
BMSER1

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: (3R)-3-hydroxyarginine => ECO:0000269|PubMed:23103944
ChainResidueDetails
BQARG81
BKLYS81
BLLYS81
BMLYS81

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
BILYS71
BILYS80

222624

PDB entries from 2024-07-17

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