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4V7Q

Atomic model of an infectious rotavirus particle

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AA0003723molecular_functionRNA binding
AA0019013cellular_componentviral nucleocapsid
AA0039616cellular_componentT=2 icosahedral viral capsid
AA0039625cellular_componentviral inner capsid
AB0003723molecular_functionRNA binding
AB0019013cellular_componentviral nucleocapsid
AB0039616cellular_componentT=2 icosahedral viral capsid
AB0039625cellular_componentviral inner capsid
AC0005198molecular_functionstructural molecule activity
AC0019028cellular_componentviral capsid
AC0019031cellular_componentviral envelope
AC0019064biological_processfusion of virus membrane with host plasma membrane
AC0039621cellular_componentT=13 icosahedral viral capsid
AC0039626cellular_componentviral intermediate capsid
AC0044650biological_processadhesion of symbiont to host cell
AC0046789molecular_functionhost cell surface receptor binding
AC0046872molecular_functionmetal ion binding
AD0005198molecular_functionstructural molecule activity
AD0019028cellular_componentviral capsid
AD0019031cellular_componentviral envelope
AD0019064biological_processfusion of virus membrane with host plasma membrane
AD0039621cellular_componentT=13 icosahedral viral capsid
AD0039626cellular_componentviral intermediate capsid
AD0044650biological_processadhesion of symbiont to host cell
AD0046789molecular_functionhost cell surface receptor binding
AD0046872molecular_functionmetal ion binding
AE0005198molecular_functionstructural molecule activity
AE0019028cellular_componentviral capsid
AE0019031cellular_componentviral envelope
AE0019064biological_processfusion of virus membrane with host plasma membrane
AE0039621cellular_componentT=13 icosahedral viral capsid
AE0039626cellular_componentviral intermediate capsid
AE0044650biological_processadhesion of symbiont to host cell
AE0046789molecular_functionhost cell surface receptor binding
AE0046872molecular_functionmetal ion binding
AF0005198molecular_functionstructural molecule activity
AF0019028cellular_componentviral capsid
AF0019031cellular_componentviral envelope
AF0019064biological_processfusion of virus membrane with host plasma membrane
AF0039621cellular_componentT=13 icosahedral viral capsid
AF0039626cellular_componentviral intermediate capsid
AF0044650biological_processadhesion of symbiont to host cell
AF0046789molecular_functionhost cell surface receptor binding
AF0046872molecular_functionmetal ion binding
AG0005198molecular_functionstructural molecule activity
AG0019028cellular_componentviral capsid
AG0019031cellular_componentviral envelope
AG0019064biological_processfusion of virus membrane with host plasma membrane
AG0039621cellular_componentT=13 icosahedral viral capsid
AG0039626cellular_componentviral intermediate capsid
AG0044650biological_processadhesion of symbiont to host cell
AG0046789molecular_functionhost cell surface receptor binding
AG0046872molecular_functionmetal ion binding
AH0005198molecular_functionstructural molecule activity
AH0019028cellular_componentviral capsid
AH0019031cellular_componentviral envelope
AH0019064biological_processfusion of virus membrane with host plasma membrane
AH0039621cellular_componentT=13 icosahedral viral capsid
AH0039626cellular_componentviral intermediate capsid
AH0044650biological_processadhesion of symbiont to host cell
AH0046789molecular_functionhost cell surface receptor binding
AH0046872molecular_functionmetal ion binding
AI0005198molecular_functionstructural molecule activity
AI0019028cellular_componentviral capsid
AI0019031cellular_componentviral envelope
AI0019064biological_processfusion of virus membrane with host plasma membrane
AI0039621cellular_componentT=13 icosahedral viral capsid
AI0039626cellular_componentviral intermediate capsid
AI0044650biological_processadhesion of symbiont to host cell
AI0046789molecular_functionhost cell surface receptor binding
AI0046872molecular_functionmetal ion binding
AJ0005198molecular_functionstructural molecule activity
AJ0019028cellular_componentviral capsid
AJ0019031cellular_componentviral envelope
AJ0019064biological_processfusion of virus membrane with host plasma membrane
AJ0039621cellular_componentT=13 icosahedral viral capsid
AJ0039626cellular_componentviral intermediate capsid
AJ0044650biological_processadhesion of symbiont to host cell
AJ0046789molecular_functionhost cell surface receptor binding
AJ0046872molecular_functionmetal ion binding
AK0005198molecular_functionstructural molecule activity
AK0019028cellular_componentviral capsid
AK0019031cellular_componentviral envelope
AK0019064biological_processfusion of virus membrane with host plasma membrane
AK0039621cellular_componentT=13 icosahedral viral capsid
AK0039626cellular_componentviral intermediate capsid
AK0044650biological_processadhesion of symbiont to host cell
AK0046789molecular_functionhost cell surface receptor binding
AK0046872molecular_functionmetal ion binding
AL0005198molecular_functionstructural molecule activity
AL0019028cellular_componentviral capsid
AL0019031cellular_componentviral envelope
AL0019064biological_processfusion of virus membrane with host plasma membrane
AL0039621cellular_componentT=13 icosahedral viral capsid
AL0039626cellular_componentviral intermediate capsid
AL0044650biological_processadhesion of symbiont to host cell
AL0046789molecular_functionhost cell surface receptor binding
AL0046872molecular_functionmetal ion binding
AM0005198molecular_functionstructural molecule activity
AM0019028cellular_componentviral capsid
AM0019031cellular_componentviral envelope
AM0019064biological_processfusion of virus membrane with host plasma membrane
AM0039621cellular_componentT=13 icosahedral viral capsid
AM0039626cellular_componentviral intermediate capsid
AM0044650biological_processadhesion of symbiont to host cell
AM0046789molecular_functionhost cell surface receptor binding
AM0046872molecular_functionmetal ion binding
AN0005198molecular_functionstructural molecule activity
AN0019028cellular_componentviral capsid
AN0019031cellular_componentviral envelope
AN0019064biological_processfusion of virus membrane with host plasma membrane
AN0039621cellular_componentT=13 icosahedral viral capsid
AN0039626cellular_componentviral intermediate capsid
AN0044650biological_processadhesion of symbiont to host cell
AN0046789molecular_functionhost cell surface receptor binding
AN0046872molecular_functionmetal ion binding
AO0005198molecular_functionstructural molecule activity
AO0019028cellular_componentviral capsid
AO0019031cellular_componentviral envelope
AO0019064biological_processfusion of virus membrane with host plasma membrane
AO0039621cellular_componentT=13 icosahedral viral capsid
AO0039626cellular_componentviral intermediate capsid
AO0044650biological_processadhesion of symbiont to host cell
AO0046789molecular_functionhost cell surface receptor binding
AO0046872molecular_functionmetal ion binding
BA0019028cellular_componentviral capsid
BA0039621cellular_componentT=13 icosahedral viral capsid
BA0039624cellular_componentviral outer capsid
BA0044165cellular_componenthost cell endoplasmic reticulum
BA0044166cellular_componenthost cell endoplasmic reticulum lumen
BA0046813biological_processreceptor-mediated virion attachment to host cell
BA0046872molecular_functionmetal ion binding
BF0019028cellular_componentviral capsid
BF0039621cellular_componentT=13 icosahedral viral capsid
BF0039624cellular_componentviral outer capsid
BF0044165cellular_componenthost cell endoplasmic reticulum
BF0044166cellular_componenthost cell endoplasmic reticulum lumen
BF0046813biological_processreceptor-mediated virion attachment to host cell
BF0046872molecular_functionmetal ion binding
BG0019028cellular_componentviral capsid
BG0039621cellular_componentT=13 icosahedral viral capsid
BG0039624cellular_componentviral outer capsid
BG0044165cellular_componenthost cell endoplasmic reticulum
BG0044166cellular_componenthost cell endoplasmic reticulum lumen
BG0046813biological_processreceptor-mediated virion attachment to host cell
BG0046872molecular_functionmetal ion binding
BH0019028cellular_componentviral capsid
BH0039621cellular_componentT=13 icosahedral viral capsid
BH0039624cellular_componentviral outer capsid
BH0044165cellular_componenthost cell endoplasmic reticulum
BH0044166cellular_componenthost cell endoplasmic reticulum lumen
BH0046813biological_processreceptor-mediated virion attachment to host cell
BH0046872molecular_functionmetal ion binding
BI0019028cellular_componentviral capsid
BI0039621cellular_componentT=13 icosahedral viral capsid
BI0039624cellular_componentviral outer capsid
BI0044165cellular_componenthost cell endoplasmic reticulum
BI0044166cellular_componenthost cell endoplasmic reticulum lumen
BI0046813biological_processreceptor-mediated virion attachment to host cell
BI0046872molecular_functionmetal ion binding
BJ0019028cellular_componentviral capsid
BJ0039621cellular_componentT=13 icosahedral viral capsid
BJ0039624cellular_componentviral outer capsid
BJ0044165cellular_componenthost cell endoplasmic reticulum
BJ0044166cellular_componenthost cell endoplasmic reticulum lumen
BJ0046813biological_processreceptor-mediated virion attachment to host cell
BJ0046872molecular_functionmetal ion binding
BK0019028cellular_componentviral capsid
BK0039621cellular_componentT=13 icosahedral viral capsid
BK0039624cellular_componentviral outer capsid
BK0044165cellular_componenthost cell endoplasmic reticulum
BK0044166cellular_componenthost cell endoplasmic reticulum lumen
BK0046813biological_processreceptor-mediated virion attachment to host cell
BK0046872molecular_functionmetal ion binding
BL0019028cellular_componentviral capsid
BL0039621cellular_componentT=13 icosahedral viral capsid
BL0039624cellular_componentviral outer capsid
BL0044165cellular_componenthost cell endoplasmic reticulum
BL0044166cellular_componenthost cell endoplasmic reticulum lumen
BL0046813biological_processreceptor-mediated virion attachment to host cell
BL0046872molecular_functionmetal ion binding
BM0019028cellular_componentviral capsid
BM0039621cellular_componentT=13 icosahedral viral capsid
BM0039624cellular_componentviral outer capsid
BM0044165cellular_componenthost cell endoplasmic reticulum
BM0044166cellular_componenthost cell endoplasmic reticulum lumen
BM0046813biological_processreceptor-mediated virion attachment to host cell
BM0046872molecular_functionmetal ion binding
BN0019028cellular_componentviral capsid
BN0039621cellular_componentT=13 icosahedral viral capsid
BN0039624cellular_componentviral outer capsid
BN0044165cellular_componenthost cell endoplasmic reticulum
BN0044166cellular_componenthost cell endoplasmic reticulum lumen
BN0046813biological_processreceptor-mediated virion attachment to host cell
BN0046872molecular_functionmetal ion binding
BO0019028cellular_componentviral capsid
BO0039621cellular_componentT=13 icosahedral viral capsid
BO0039624cellular_componentviral outer capsid
BO0044165cellular_componenthost cell endoplasmic reticulum
BO0044166cellular_componenthost cell endoplasmic reticulum lumen
BO0046813biological_processreceptor-mediated virion attachment to host cell
BO0046872molecular_functionmetal ion binding
BP0019028cellular_componentviral capsid
BP0039621cellular_componentT=13 icosahedral viral capsid
BP0039624cellular_componentviral outer capsid
BP0044165cellular_componenthost cell endoplasmic reticulum
BP0044166cellular_componenthost cell endoplasmic reticulum lumen
BP0046813biological_processreceptor-mediated virion attachment to host cell
BP0046872molecular_functionmetal ion binding
BQ0019028cellular_componentviral capsid
BQ0039621cellular_componentT=13 icosahedral viral capsid
BQ0039624cellular_componentviral outer capsid
BQ0044165cellular_componenthost cell endoplasmic reticulum
BQ0044166cellular_componenthost cell endoplasmic reticulum lumen
BQ0046813biological_processreceptor-mediated virion attachment to host cell
BQ0046872molecular_functionmetal ion binding
BX0016020cellular_componentmembrane
BX0019028cellular_componentviral capsid
BX0019058biological_processviral life cycle
BX0019062biological_processvirion attachment to host cell
BX0020002cellular_componenthost cell plasma membrane
BX0030430cellular_componenthost cell cytoplasm
BX0039624cellular_componentviral outer capsid
BX0039665biological_processpermeabilization of host organelle membrane involved in viral entry into host cell
BX0044163cellular_componenthost cytoskeleton
BX0044165cellular_componenthost cell endoplasmic reticulum
BX0044168cellular_componenthost cell rough endoplasmic reticulum
BX0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
BX0046718biological_processsymbiont entry into host cell
BX0140267biological_processsymbiont entry into host cell via permeabilization of host membrane
BY0016020cellular_componentmembrane
BY0019028cellular_componentviral capsid
BY0019058biological_processviral life cycle
BY0019062biological_processvirion attachment to host cell
BY0020002cellular_componenthost cell plasma membrane
BY0030430cellular_componenthost cell cytoplasm
BY0039624cellular_componentviral outer capsid
BY0039665biological_processpermeabilization of host organelle membrane involved in viral entry into host cell
BY0044163cellular_componenthost cytoskeleton
BY0044165cellular_componenthost cell endoplasmic reticulum
BY0044168cellular_componenthost cell rough endoplasmic reticulum
BY0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
BY0046718biological_processsymbiont entry into host cell
BY0140267biological_processsymbiont entry into host cell via permeabilization of host membrane
BZ0016020cellular_componentmembrane
BZ0019028cellular_componentviral capsid
BZ0019058biological_processviral life cycle
BZ0019062biological_processvirion attachment to host cell
BZ0020002cellular_componenthost cell plasma membrane
BZ0030430cellular_componenthost cell cytoplasm
BZ0039624cellular_componentviral outer capsid
BZ0039665biological_processpermeabilization of host organelle membrane involved in viral entry into host cell
BZ0044163cellular_componenthost cytoskeleton
BZ0044165cellular_componenthost cell endoplasmic reticulum
BZ0044168cellular_componenthost cell rough endoplasmic reticulum
BZ0044172cellular_componenthost cell endoplasmic reticulum-Golgi intermediate compartment
BZ0046718biological_processsymbiont entry into host cell
BZ0140267biological_processsymbiont entry into host cell via permeabilization of host membrane
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues78
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_04131, ECO:0000269|PubMed:19520960
ChainResidueDetails
BAASP95
BFASP228
BFVAL229
BFASP301
BGASP95
BGGLN177
BGGLY206
BGASP228
BGVAL229
BGASP301
BHASP95
BAGLN177
BHGLN177
BHGLY206
BHASP228
BHVAL229
BHASP301
BIASP95
BIGLN177
BIGLY206
BIASP228
BIVAL229
BAGLY206
BIASP301
BJASP95
BJGLN177
BJGLY206
BJASP228
BJVAL229
BJASP301
BKASP95
BKGLN177
BKGLY206
BAASP228
BKASP228
BKVAL229
BKASP301
BLASP95
BLGLN177
BLGLY206
BLASP228
BLVAL229
BLASP301
BMASP95
BAVAL229
BMGLN177
BMGLY206
BMASP228
BMVAL229
BMASP301
BNASP95
BNGLN177
BNGLY206
BNASP228
BNVAL229
BAASP301
BNASP301
BOASP95
BOGLN177
BOGLY206
BOASP228
BOVAL229
BOASP301
BPASP95
BPGLN177
BPGLY206
BFASP95
BPASP228
BPVAL229
BPASP301
BQASP95
BQGLN177
BQGLY206
BQASP228
BQVAL229
BQASP301
BFGLN177
BFGLY206

site_idSWS_FT_FI2
Number of Residues39
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_04131, ECO:0000269|PubMed:19487668, ECO:0000269|PubMed:19520960
ChainResidueDetails
BATHR214
BHTHR214
BHGLU216
BHASP231
BITHR214
BIGLU216
BIASP231
BJTHR214
BJGLU216
BJASP231
BKTHR214
BAGLU216
BKGLU216
BKASP231
BLTHR214
BLGLU216
BLASP231
BMTHR214
BMGLU216
BMASP231
BNTHR214
BNGLU216
BAASP231
BNASP231
BOTHR214
BOGLU216
BOASP231
BPTHR214
BPGLU216
BPASP231
BQTHR214
BQGLU216
BQASP231
BFTHR214
BFGLU216
BFASP231
BGTHR214
BGGLU216
BGASP231

site_idSWS_FT_FI3
Number of Residues13
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:19487668, ECO:0000269|PubMed:21157433
ChainResidueDetails
BAASN69
BNASN69
BOASN69
BPASN69
BQASN69
BFASN69
BGASN69
BHASN69
BIASN69
BJASN69
BKASN69
BLASN69
BMASN69

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PDB entries from 2024-07-24

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