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4UTQ

A structural model of the active ribosome-bound membrane protein insertase YidC

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006457biological_processprotein folding
A0015031biological_processprotein transport
A0016020cellular_componentmembrane
A0031522cellular_componentcell envelope Sec protein transport complex
A0032977molecular_functionmembrane insertase activity
A0032978biological_processprotein insertion into membrane from inner side
A0043952biological_processprotein transport by the Sec complex
A0051205biological_processprotein insertion into membrane
A0065003biological_processprotein-containing complex assembly
Z0005886cellular_componentplasma membrane
Z0006754biological_processATP biosynthetic process
Z0008289molecular_functionlipid binding
Z0015078molecular_functionproton transmembrane transporter activity
Z0015986biological_processproton motive force-driven ATP synthesis
Z0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
Z0042777biological_processproton motive force-driven plasma membrane ATP synthesis
Z0045259cellular_componentproton-transporting ATP synthase complex
Z0045263cellular_componentproton-transporting ATP synthase complex, coupling factor F(o)
Z0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
Z0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
Z1902600biological_processproton transmembrane transport
Functional Information from PROSITE/UniProt
site_idPS00605
Number of Residues22
DetailsATPASE_C ATP synthase c subunit signature. ARQPdliplLrTqfFIvmgLvD
ChainResidueDetails
ZALA40-ASP61

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsTOPO_DOM: Periplasmic
ChainResidueDetails
ZMET1-TYR10
ZVAL74-ALA79

site_idSWS_FT_FI2
Number of Residues40
DetailsTRANSMEM: Helical
ChainResidueDetails
ZMET11-LEU31
ZPHE53-TYR73
AVAL417-LEU446
ATYR464-MET481
AILE494-PHE509
ALEU513-LEU535

site_idSWS_FT_FI3
Number of Residues20
DetailsTOPO_DOM: Cytoplasmic
ChainResidueDetails
ZGLY32-GLN52
AARG447-PRO463
APRO510-GLY512

site_idSWS_FT_FI4
Number of Residues1
DetailsSITE: Reversibly protonated during proton transport
ChainResidueDetails
ZASP61
ASER482-LYS493
AGLU536-SER548

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N-formylmethionine => ECO:0000250
ChainResidueDetails
ZMET1

Catalytic Information from CSA
site_idMCSA1
Number of Residues1
DetailsM-CSA 507
ChainResidueDetails
ZASP61electrostatic stabiliser, proton acceptor, proton donor

224004

PDB entries from 2024-08-21

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