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4UFV

Plasmodium vivax N-myristoyltransferase in complex with a pyridyl inhibitor (compound 18)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0005737cellular_componentcytoplasm
A0006499biological_processN-terminal protein myristoylation
A0016746molecular_functionacyltransferase activity
A0018008biological_processN-terminal peptidyl-glycine N-myristoylation
A0046872molecular_functionmetal ion binding
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0005737cellular_componentcytoplasm
B0006499biological_processN-terminal protein myristoylation
B0016746molecular_functionacyltransferase activity
B0018008biological_processN-terminal peptidyl-glycine N-myristoylation
B0046872molecular_functionmetal ion binding
C0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
C0005737cellular_componentcytoplasm
C0006499biological_processN-terminal protein myristoylation
C0016746molecular_functionacyltransferase activity
C0018008biological_processN-terminal peptidyl-glycine N-myristoylation
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues40
DetailsBINDING SITE FOR RESIDUE NHW A 1000
ChainResidue
ATYR28
ALEU163
ACYS164
AVAL165
AARG170
ASER171
ALYS172
AARG173
ALEU174
AALA175
APRO176
ALYS29
ATHR183
AILE186
AASN187
ATRP192
AGLN193
AALA194
ATYR196
ATHR197
ALEU202
ATYR393
APHE30
AMG1411
AHOH2001
AHOH2003
AHOH2216
AHOH2222
AHOH2421
AHOH2422
AHOH2423
AHOH2424
AHOH2425
ATRP31
AHOH2426
AASN94
ATYR95
AVAL96
AASN161
APHE162

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE 31A A 1001
ChainResidue
AVAL96
AGLU97
AASP98
APHE103
APHE105
ATYR107
ATHR197
ATYR211
APHE226
ATYR315
ASER319
ATYR334
ALEU388
ALEU409
ALEU410
AHOH2235
AHOH2237
AHOH2368

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1411
ChainResidue
ALEU169
ASER171
ALYS172
AARG173
ALEU174
ANHW1000

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1412
ChainResidue
ALYS180
ATHR247
ALEU248
AARG358

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 1413
ChainResidue
AGLU159
APHE281
ATRP289
AHOH2373

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 1414
ChainResidue
AASN295
ASER316
AASN359
APHE361

site_idAC7
Number of Residues40
DetailsBINDING SITE FOR RESIDUE NHW B 1000
ChainResidue
BTRP192
BGLN193
BTYR196
BTHR197
BLEU202
BTYR393
BMG1412
BHOH2001
BHOH2003
BHOH2181
BHOH2184
BHOH2372
BHOH2373
BHOH2374
BHOH2375
BHOH2376
BHOH2377
BTYR28
BLYS29
BPHE30
BTRP31
BASN94
BTYR95
BVAL96
BVAL160
BASN161
BPHE162
BLEU163
BCYS164
BVAL165
BARG170
BSER171
BLYS172
BARG173
BLEU174
BALA175
BPRO176
BTHR183
BILE186
BASN187

site_idAC8
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 31A B 1001
ChainResidue
BVAL96
BGLU97
BASP98
BPHE103
BPHE105
BTYR107
BTHR197
BTYR211
BTYR315
BSER319
BTYR334
BLEU409
BLEU410
BHOH2199
BHOH2201

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 1411
ChainResidue
AARG210
ALYS373
BARG210
BLYS373
BHOH2212

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1412
ChainResidue
BLEU169
BSER171
BLYS172
BARG173
BLEU174
BNHW1000

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 1413
ChainResidue
BLYS180
BTHR247
BLEU248
BARG358
BHOH2264

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS B 1414
ChainResidue
BGLU159
BPHE281
BTRP289
BHOH2333

site_idBC4
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NHW C 1000
ChainResidue
CTYR28
CLYS29
CPHE30
CTRP31
CASN94
CTYR95
CVAL96
CASN161
CPHE162
CLEU163
CCYS164
CVAL165
CARG170
CSER171
CLYS172
CARG173
CLEU174
CALA175
CPRO176
CTHR183
CTRP192
CALA194
CTHR197
CLEU202
CTYR393
CMG1411
CHOH2001
CHOH2189
CHOH2196
CHOH2360
CHOH2361
CHOH2362
CHOH2363
CHOH2364

site_idBC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 31A C 1001
ChainResidue
CVAL96
CGLU97
CASP98
CPHE103
CPHE105
CTYR107
CTHR197
CTYR211
CSER319
CTYR334
CLEU388
CLEU409
CLEU410
CHOH2209

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 1411
ChainResidue
CLEU169
CSER171
CLYS172
CARG173
CLEU174
CNHW1000

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 1412
ChainResidue
CLYS180
CLEU248
CARG358

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS C 1413
ChainResidue
CGLU159
CPHE281
CTRP289
CHOH2315

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOA C 1414
ChainResidue
CALA115
CGLU159
CASN161
CPHE162
CLEU410
CHOH2162

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EVNFLCvHK
ChainResidueDetails
AGLU159-LYS167

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGeGDG
ChainResidueDetails
ALYS380-GLY386

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PDB entries from 2024-10-16

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