4UDP
Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| A | 0016670 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
| A | 0016899 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor |
| A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| A | 0055114 | biological_process | obsolete oxidation-reduction process |
| A | 0071949 | molecular_function | FAD binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| B | 0016670 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
| B | 0016899 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor |
| B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| B | 0055114 | biological_process | obsolete oxidation-reduction process |
| B | 0071949 | molecular_function | FAD binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 38 |
| Details | BINDING SITE FOR RESIDUE FAD A 700 |
| Chain | Residue |
| A | GLY12 |
| A | GLY92 |
| A | ARG93 |
| A | LEU94 |
| A | GLY97 |
| A | GLY98 |
| A | VAL101 |
| A | ASN102 |
| A | MET103 |
| A | VAL104 |
| A | VAL105 |
| A | GLY14 |
| A | SER231 |
| A | VAL233 |
| A | THR265 |
| A | ALA266 |
| A | GLY267 |
| A | TRP466 |
| A | ASP500 |
| A | ALA501 |
| A | ASN511 |
| A | THR512 |
| A | THR15 |
| A | ASN513 |
| A | THR516 |
| A | HOH2001 |
| A | HOH2043 |
| A | HOH2044 |
| A | HOH2045 |
| A | HOH2048 |
| A | HOH2115 |
| A | HOH2162 |
| A | ALA16 |
| A | GLU36 |
| A | ALA37 |
| A | ARG60 |
| A | TRP68 |
| A | GLU90 |
| site_id | AC2 |
| Number of Residues | 40 |
| Details | BINDING SITE FOR RESIDUE FAD B 700 |
| Chain | Residue |
| B | GLY12 |
| B | GLY14 |
| B | THR15 |
| B | ALA16 |
| B | ILE35 |
| B | GLU36 |
| B | ALA37 |
| B | ARG60 |
| B | TRP68 |
| B | GLU90 |
| B | GLY92 |
| B | ARG93 |
| B | LEU94 |
| B | GLY97 |
| B | GLY98 |
| B | VAL101 |
| B | ASN102 |
| B | MET103 |
| B | VAL104 |
| B | VAL105 |
| B | SER231 |
| B | VAL233 |
| B | THR265 |
| B | ALA266 |
| B | GLY267 |
| B | TRP466 |
| B | ASP500 |
| B | ALA501 |
| B | ASN511 |
| B | THR512 |
| B | ASN513 |
| B | THR516 |
| B | HOH2001 |
| B | HOH2026 |
| B | HOH2027 |
| B | HOH2028 |
| B | HOH2032 |
| B | HOH2099 |
| B | HOH2158 |
| B | HOH2166 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"24271187","evidenceCode":"ECO:0000305"},{"source":"Reference","evidenceCode":"ECO:0000305","citation":{"citationType":"journal article","publicationDate":"2015","firstPage":"1833","lastPage":"1839","volume":"5","journal":"ACS Catal.","title":"Structure-based enzyme tailoring of 5-hydroxymethylfurfural oxidase.","authors":["Dijkman W.P.","Binda C.","Fraaije M.W.","Mattevi A."],"citationCrossReferences":[{"database":"DOI","id":"10.1021/ACSCATAL.5B00031"}]}}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 22 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000305","citation":{"citationType":"journal article","publicationDate":"2015","firstPage":"1833","lastPage":"1839","volume":"5","journal":"ACS Catal.","title":"Structure-based enzyme tailoring of 5-hydroxymethylfurfural oxidase.","authors":["Dijkman W.P.","Binda C.","Fraaije M.W.","Mattevi A."],"citationCrossReferences":[{"database":"DOI","id":"10.1021/ACSCATAL.5B00031"}]}},{"source":"PDB","id":"4UDP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UDQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UDR","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"4UDR","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
