4UDP
Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
A | 0016670 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
A | 0016899 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor |
A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
A | 0055114 | biological_process | obsolete oxidation-reduction process |
A | 0071949 | molecular_function | FAD binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
B | 0016670 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
B | 0016899 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0055114 | biological_process | obsolete oxidation-reduction process |
B | 0071949 | molecular_function | FAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 38 |
Details | BINDING SITE FOR RESIDUE FAD A 700 |
Chain | Residue |
A | GLY12 |
A | GLY92 |
A | ARG93 |
A | LEU94 |
A | GLY97 |
A | GLY98 |
A | VAL101 |
A | ASN102 |
A | MET103 |
A | VAL104 |
A | VAL105 |
A | GLY14 |
A | SER231 |
A | VAL233 |
A | THR265 |
A | ALA266 |
A | GLY267 |
A | TRP466 |
A | ASP500 |
A | ALA501 |
A | ASN511 |
A | THR512 |
A | THR15 |
A | ASN513 |
A | THR516 |
A | HOH2001 |
A | HOH2043 |
A | HOH2044 |
A | HOH2045 |
A | HOH2048 |
A | HOH2115 |
A | HOH2162 |
A | ALA16 |
A | GLU36 |
A | ALA37 |
A | ARG60 |
A | TRP68 |
A | GLU90 |
site_id | AC2 |
Number of Residues | 40 |
Details | BINDING SITE FOR RESIDUE FAD B 700 |
Chain | Residue |
B | GLY12 |
B | GLY14 |
B | THR15 |
B | ALA16 |
B | ILE35 |
B | GLU36 |
B | ALA37 |
B | ARG60 |
B | TRP68 |
B | GLU90 |
B | GLY92 |
B | ARG93 |
B | LEU94 |
B | GLY97 |
B | GLY98 |
B | VAL101 |
B | ASN102 |
B | MET103 |
B | VAL104 |
B | VAL105 |
B | SER231 |
B | VAL233 |
B | THR265 |
B | ALA266 |
B | GLY267 |
B | TRP466 |
B | ASP500 |
B | ALA501 |
B | ASN511 |
B | THR512 |
B | ASN513 |
B | THR516 |
B | HOH2001 |
B | HOH2026 |
B | HOH2027 |
B | HOH2028 |
B | HOH2032 |
B | HOH2099 |
B | HOH2158 |
B | HOH2166 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor => ECO:0000305|PubMed:24271187, ECO:0000305|DOI:10.1021/ACSCATAL.5B00031 |
Chain | Residue | Details |
A | HIS467 | |
B | HIS467 |
site_id | SWS_FT_FI2 |
Number of Residues | 18 |
Details | BINDING: BINDING => ECO:0000305|DOI:10.1021/ACSCATAL.5B00031, ECO:0007744|PDB:4UDP, ECO:0007744|PDB:4UDQ, ECO:0007744|PDB:4UDR |
Chain | Residue | Details |
A | THR15 | |
B | THR15 | |
B | GLU36 | |
B | TRP68 | |
B | LEU94 | |
B | GLY98 | |
B | ASN102 | |
B | VAL233 | |
B | ALA501 | |
B | THR512 | |
A | GLU36 | |
A | TRP68 | |
A | LEU94 | |
A | GLY98 | |
A | ASN102 | |
A | VAL233 | |
A | ALA501 | |
A | THR512 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0007744|PDB:4UDR |
Chain | Residue | Details |
A | TRP466 | |
B | TRP466 |