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4U9U

Crystal structure of NqrF FAD-binding domain from Vibrio cholerae

Functional Information from GO Data
ChainGOidnamespacecontents
A0006814biological_processsodium ion transport
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0016655molecular_functionoxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
A0051537molecular_function2 iron, 2 sulfur cluster binding
B0006814biological_processsodium ion transport
B0016020cellular_componentmembrane
B0016491molecular_functionoxidoreductase activity
B0016655molecular_functionoxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
B0051537molecular_function2 iron, 2 sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue FAD A 1501
ChainResidue
AARG210
APRO233
APRO241
APRO242
AGLY243
AGLN244
AMET245
ASER246
APHE406
AHOH1635
AHOH1672
AALA211
AHOH1675
AHOH1690
AHOH1702
AHOH1742
AHOH1755
AHOH1792
BGLU398
BHOH1603
ATYR212
ASER213
AASN227
AVAL228
AARG229
AALA231
ATHR232

site_idAC2
Number of Residues8
Detailsbinding site for residue ACT A 1502
ChainResidue
AARG229
AGLY282
AALA283
AGLY284
AGLY379
APRO380
AHOH1746
AHOH1819

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 1503
ChainResidue
ALYS143
ATYR188
AARG315
AMET317
AHOH1783
AHOH1852

site_idAC4
Number of Residues5
Detailsbinding site for residue NA A 1504
ChainResidue
AALA327
AASN330
APHE333
AHOH1796
AHOH1826

site_idAC5
Number of Residues27
Detailsbinding site for residue FAD B 1501
ChainResidue
AHOH1604
BARG210
BALA211
BTYR212
BSER213
BASN227
BVAL228
BARG229
BALA231
BTHR232
BPRO233
BVAL240
BPRO241
BPRO242
BGLY243
BGLN244
BMET245
BSER246
BPHE406
BHOH1618
BHOH1622
BHOH1684
BHOH1710
BHOH1713
BHOH1740
BHOH1746
BHOH1770

site_idAC6
Number of Residues8
Detailsbinding site for residue ACT B 1502
ChainResidue
BARG229
BGLY281
BGLY282
BALA283
BGLY284
BGLY379
BPRO380
BHOH1778

site_idAC7
Number of Residues6
Detailsbinding site for residue MG B 1503
ChainResidue
BLYS143
BTYR188
BARG315
BMET317
BHOH1767
BHOH1806

site_idAC8
Number of Residues6
Detailsbinding site for residue NA B 1504
ChainResidue
BALA327
BASN330
BPHE333
BHOH1730
BHOH1807
BHOH1847

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PDB entries from 2024-05-01

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