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4U9D

Crystal Structure of the Zn-directed tetramer of the engineered cyt cb562 variant, AB3

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0022900biological_processelectron transport chain
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
B0005506molecular_functioniron ion binding
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0022900biological_processelectron transport chain
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
C0005506molecular_functioniron ion binding
C0009055molecular_functionelectron transfer activity
C0020037molecular_functionheme binding
C0022900biological_processelectron transport chain
C0042597cellular_componentperiplasmic space
C0046872molecular_functionmetal ion binding
D0005506molecular_functioniron ion binding
D0009055molecular_functionelectron transfer activity
D0020037molecular_functionheme binding
D0022900biological_processelectron transport chain
D0042597cellular_componentperiplasmic space
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue HEC A 201
ChainResidue
AMET7
ATYR105
BLYS15
BARG106
ALEU10
AASN11
APRO45
APRO46
APHE61
ACYS98
ACYS101
AHIS102

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 202
ChainResidue
AGLU86
AHIS89
CHIS100
CLYS104

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 203
ChainResidue
AHIS73
AHIS77
BASP74
DHIS63

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 204
ChainResidue
AASP74
BHIS73
BHIS77
CHIS63

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 205
ChainResidue
AHIS100
ALYS104
CGLU86
CHIS89

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN A 206
ChainResidue
AHIS63
CASP74
DHIS73
DHIS77

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN B 202
ChainResidue
BGLU86
BHIS89
DHIS100
DLYS104

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN B 203
ChainResidue
BHIS63
CHIS73
CHIS77
DASP74

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN B 204
ChainResidue
BHIS100
BLYS104
DGLU86
DHIS89

site_idAD1
Number of Residues16
Detailsbinding site for Di-peptide HEM B 201 and CYS B 98
ChainResidue
AARG106
AHOH303
BGLU4
BMET7
BASN11
BPRO46
BPHE61
BLEU94
BLYS95
BCYS96
BTHR97
BASN99
BHIS100
BCYS101
BHIS102
BARG106

site_idAD2
Number of Residues16
Detailsbinding site for Di-peptide HEM B 201 and CYS B 101
ChainResidue
AARG106
AHOH303
BGLU4
BMET7
BASN11
BPRO46
BPHE61
BTHR97
BCYS98
BASN99
BHIS100
BHIS102
BGLN103
BLYS104
BTYR105
BARG106

site_idAD3
Number of Residues15
Detailsbinding site for Di-peptide HEM C 201 and CYS C 101
ChainResidue
CGLU4
CMET7
CASN11
CPRO46
CPHE61
CLEU68
CTHR97
CCYS98
CASN99
CHIS100
CHIS102
CGLN103
CLYS104
CTYR105
CARG106

site_idAD4
Number of Residues15
Detailsbinding site for Di-peptide HEM C 201 and CYS C 98
ChainResidue
CCYS96
CTHR97
CASN99
CHIS100
CCYS101
CHIS102
CARG106
CGLU4
CMET7
CASN11
CPRO46
CPHE61
CLEU68
CLEU94
CLYS95

site_idAD5
Number of Residues16
Detailsbinding site for Di-peptide HEM D 201 and CYS D 101
ChainResidue
DLEU3
DGLU4
DMET7
DLEU10
DASN11
DPHE61
DLEU68
DTHR97
DCYS98
DASN99
DHIS100
DHIS102
DGLN103
DLYS104
DTYR105
DARG106

site_idAD6
Number of Residues17
Detailsbinding site for Di-peptide HEM D 201 and CYS D 98
ChainResidue
DLEU3
DGLU4
DMET7
DLEU10
DASN11
DPHE61
DLEU68
DLEU94
DLYS95
DCYS96
DTHR97
DASN99
DHIS100
DCYS101
DHIS102
DTYR105
DARG106

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: axial binding residue
ChainResidueDetails
AMET7
AHIS102
BMET7
BHIS102
CMET7
CHIS102
DMET7
DHIS102

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PDB entries from 2025-06-11

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