Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4U8W

HIV-1 wild Type protease with GRL-050-10A (a Gem-difluoro-bis-Tetrahydrofuran as P2-Ligand)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues32
Detailsbinding site for residue G10 A 201
ChainResidue
AASP25
APRO81
AVAL82
AILE84
AHOH318
AHOH319
AHOH339
BARG8
BASP25
BGLY27
BALA28
AGLY27
BASP29
BASP30
BVAL32
BGLY48
BGLY49
BILE50
BPRO81
BVAL82
BILE84
BHOH224
AALA28
BHOH225
BHOH270
BHOH271
AASP29
AASP30
AVAL32
AGLY48
AGLY49
AILE50

site_idAC2
Number of Residues6
Detailsbinding site for residue NA A 202
ChainResidue
AASP60
AHOH321
AHOH322
AHOH323
AHOH355
AHOH368

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 203
ChainResidue
ATHR74
AASN88
BARG41

site_idAC4
Number of Residues2
Detailsbinding site for residue CL B 101
ChainResidue
BTRP6
BACT104

site_idAC5
Number of Residues3
Detailsbinding site for residue CL B 102
ChainResidue
BTHR74
BASN88
BHOH234

site_idAC6
Number of Residues6
Detailsbinding site for residue ACT B 103
ChainResidue
BPRO39
BARG41
BTYR59
BASP60
BHOH253
BHOH254

site_idAC7
Number of Residues4
Detailsbinding site for residue ACT B 104
ChainResidue
BTHR4
BPRO44
BLYS55
BCL101

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12924029","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon