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4U7A

The carboxy-terminal domain of Erb1 is a seven-bladed beta-propeller that binds RNA.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0003674molecular_functionmolecular_function
A0003677molecular_functionDNA binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005730cellular_componentnucleolus
A0006364biological_processrRNA processing
A0030687cellular_componentpreribosome, large subunit precursor
A0042254biological_processribosome biogenesis
A0042273biological_processribosomal large subunit biogenesis
A0043021molecular_functionribonucleoprotein complex binding
A0070180molecular_functionlarge ribosomal subunit rRNA binding
A0070545cellular_componentPeBoW complex
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue EDO A 901
ChainResidue
AASP446
APRO447
AASN498
AASN499
AGLY500
APHE518
AILE522
AHOH1093
AHOH1153

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO A 902
ChainResidue
AILE432
AVAL472
AILE517
AGLY772
AARG803
AHOH1036
AHOH1058

site_idAC3
Number of Residues9
Detailsbinding site for residue GOL A 903
ChainResidue
ALYS639
AGLY640
AILE641
ASER658
AGLN659
AARG660
ATYR661
AARG663
AHOH1201

site_idAC4
Number of Residues1
Detailsbinding site for residue EOH A 904
ChainResidue
ATYR608

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LATGsdDgTVRVWEI
ChainResidueDetails
ALEU452-ILE466

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues39
DetailsRepeat: {"description":"WD 1","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues40
DetailsRepeat: {"description":"WD 2","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues42
DetailsRepeat: {"description":"WD 3","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues38
DetailsRepeat: {"description":"WD 4","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues39
DetailsRepeat: {"description":"WD 5","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues39
DetailsRepeat: {"description":"WD 6","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues31
DetailsRepeat: {"description":"WD 7","evidences":[{"source":"HAMAP-Rule","id":"MF_03027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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