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4S2X

Structure of E. coli RppH bound to RNA and two magnesium ions

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0006402biological_processmRNA catabolic process
A0008033biological_processtRNA processing
A0016462molecular_functionpyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0034353molecular_functionmRNA 5'-diphosphatase activity
A0050779biological_processRNA destabilization
A0110153molecular_functionRNA NAD-cap (NMN-forming) hydrolase activity
A0110154biological_processRNA decapping
A0110155biological_processNAD-cap decapping
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MG A 201
ChainResidue
AGLU54
AGLU57
AGLU58
AGLU121
AMG202
ASO4204
AHOH374
BAPC1

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 202
ChainResidue
AGLU58
AGLU121
AMG201
BAPC1
BHOH102
AGLN38

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 203
ChainResidue
AASN18
AARG19
AARG19
AGLN20
AHOH332

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 204
ChainResidue
AARG9
AGLY40
AARG53
AGLU54
AGLU57
AMG201
AHOH374
AHOH381
BAPC1

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GginpgEsaeqAMyRELfEEvG
ChainResidueDetails
AGLY39-GLY60

222624

PDB entries from 2024-07-17

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