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4ROS

Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004459molecular_functionL-lactate dehydrogenase activity
A0006089biological_processlactate metabolic process
A0006090biological_processpyruvate metabolic process
A0006099biological_processtricarboxylic acid cycle
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019752biological_processcarboxylic acid metabolic process
A0030060molecular_functionL-malate dehydrogenase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 401
ChainResidue
AGLU287
AGLU287
AHOH619
AHOH620
AHOH621
AHOH622
AHOH623

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 402
ChainResidue
AHOH561
AHOH603
AGLU166
AHOH519

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE OAA A 403
ChainResidue
AARG83
AARG89
AASN121
ALEU148
AARG152
AHIS176
AGLY219
AALA231
AAPR404
AHOH526
AHOH577
AHOH591

site_idAC4
Number of Residues25
DetailsBINDING SITE FOR RESIDUE APR A 404
ChainResidue
AGLY12
AGLN13
AILE14
APHE33
AASP34
AILE35
AVAL36
ATHR78
AALA79
AGLY80
AVAL81
APRO82
AASN96
AVAL99
AILE119
ATHR120
AASN121
AOAA403
AHOH510
AHOH526
AHOH534
AHOH547
AHOH552
AHOH591
AHOH611

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00487
ChainResidueDetails
AHIS176

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00487
ChainResidueDetails
AGLY10
AASP34
AARG83
AARG89
AASN96
AILE119
AASN121
AARG152

226707

PDB entries from 2024-10-30

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