4R0D

Crystal structure of a eukaryotic group II intron lariat

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SPM A 701

Chain	Residue
A	A20
A	A21
A	G23

---

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SPM A 702

Chain	Residue
A	G517
A	U518
A	C531
A	U533

---

site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 703

Chain	Residue
A	A17
A	G18

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE IRI A 704

Chain	Residue
A	U170
A	A171
A	C554
A	U569
A	C570

---

site_id	AC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 706

Chain	Residue
A	U294

---

site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 707

Chain	Residue
A	U520
A	G521

---

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 708

Chain	Residue
A	G431
A	C491
A	G493

---

site_id	AC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE IRI A 709

Chain	Residue
A	G10
A	U14
A	U15
A	G338
A	G339

---

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IRI A 710

Chain	Residue
A	A6
A	C495
A	U496
A	C578

---

site_id	BC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE IRI A 711

Chain	Residue
A	A165
A	U166
A	G167
A	G168
A	HOH982

---

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 712

Chain	Residue
A	U183
A	U301

---

site_id	BC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 713

Chain	Residue
A	G114

---

site_id	BC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 714

Chain	Residue
A	G148
A	MG761

---

site_id	BC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 716

Chain	Residue
A	U508

---

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 717

Chain	Residue
A	G593
A	U608
A	HOH1005

---

site_id	BC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 718

Chain	Residue
A	G382
A	G383

---

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IRI A 720

Chain	Residue
A	U347
A	A348
A	A349
A	G415

---

site_id	BC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 721

Chain	Residue
A	G346

---

site_id	CC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 722

Chain	Residue
A	C342
A	U343

---

site_id	CC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 723

Chain	Residue
A	U100

---

site_id	CC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IRI A 724

Chain	Residue
A	G180
A	U183
A	A184
A	IRI725

---

site_id	CC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE IRI A 725

Chain	Residue
A	U164
A	C179
A	G180
A	A182
A	IRI724

---

site_id	CC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 726

Chain	Residue
A	U158
A	G325

---

site_id	CC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 727

Chain	Residue
A	G37
A	U38
A	A324

---

site_id	CC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 729

Chain	Residue
A	A458
A	G459

---

site_id	CC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IRI A 730

Chain	Residue
A	G33
A	A35
A	HOH904
A	HOH995

---

site_id	CC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 731

Chain	Residue
A	A371
A	U461

---

site_id	DC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 732

Chain	Residue
A	G588
A	G589
A	G590

---

site_id	DC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 733

Chain	Residue
A	G379
A	G380

---

site_id	DC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IRI A 734

Chain	Residue
A	G385
A	U386

---

site_id	DC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 735

Chain	Residue
A	G227

---

site_id	DC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 736

Chain	Residue
A	U262
A	G263
A	G264

---

site_id	DC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IRI A 737

Chain	Residue
A	G266

---

site_id	DC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 738

Chain	Residue
A	G448
A	U449
A	C452

---

site_id	DC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE IRI A 739

Chain	Residue
A	G81
A	U82
A	G391
A	C392
A	A393

---

site_id	DC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IRI A 740

Chain	Residue
A	U26
A	G28
A	G88

---

site_id	EC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 741

Chain	Residue
A	A551
A	G552
A	A574
A	MG742
B	C14
A	G550

---

site_id	EC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 742

Chain	Residue
A	G552
A	C572
A	A574
A	MG741
B	A13
B	C14

---

site_id	EC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 743

Chain	Residue
A	U2
A	C4
A	G5

---

site_id	EC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 744

Chain	Residue
A	A6
A	C7
A	A341
A	HOH1002

---

site_id	EC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 745

Chain	Residue
A	A359
A	A359

---

site_id	EC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 746

Chain	Residue
A	A340
A	HOH1009

---

site_id	EC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 749

Chain	Residue
A	G524
A	C527

---

site_id	EC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 750

Chain	Residue
A	G430
A	G431

---

site_id	EC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 751

Chain	Residue
A	C353

---

site_id	FC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 752

Chain	Residue
A	A410

---

site_id	FC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 754

Chain	Residue
A	G564

---

site_id	FC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 755

Chain	Residue
A	U260

---

site_id	FC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 756

Chain	Residue
A	U14
A	C109

---

site_id	FC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 757

Chain	Residue
A	HOH1001

---

site_id	FC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 760

Chain	Residue
A	A303
A	A303
A	G304
A	G304

---

site_id	FC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 761

Chain	Residue
A	IRI714

---

site_id	FC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 764

Chain	Residue
A	G28

---

site_id	FC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 766

Chain	Residue
A	U332
A	U333

---

site_id	GC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 768

Chain	Residue
A	U504

---

site_id	GC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 769

Chain	Residue
A	G103

---

site_id	GC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 771

Chain	Residue
A	U247

---

site_id	GC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 772

Chain	Residue
A	U449
A	HOH983

---

site_id	GC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 774

Chain	Residue
A	G505

---

site_id	GC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 776

Chain	Residue
A	C553

---

site_id	GC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 777

Chain	Residue
A	A184
A	G302
A	G302
A	A303

---

site_id	GC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 778

Chain	Residue
A	G568

---

site_id	GC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 779

Chain	Residue
A	G60

---

site_id	HC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 781

Chain	Residue
A	G198
A	U199

---

site_id	HC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 782

Chain	Residue
A	G198
A	HOH994

---

site_id	HC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 783

Chain	Residue
A	C375
A	U481

---

site_id	HC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 784

Chain	Residue
A	G106
A	C107

---

site_id	HC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 785

Chain	Residue
A	HOH1003

---

site_id	HC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 786

Chain	Residue
A	G33
A	A34
A	A35
A	HOH992

---

site_id	HC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 787

Chain	Residue
A	G380

---

site_id	HC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 788

Chain	Residue
A	G231
A	A232

---

site_id	HC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 790

Chain	Residue
A	U409
A	A410
A	NA825

---

site_id	IC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 791

Chain	Residue
A	G65
A	U66
A	HOH978

---

site_id	IC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 792

Chain	Residue
A	G370
A	A372

---

site_id	IC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 793

Chain	Residue
A	C606

---

site_id	IC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 794

Chain	Residue
A	G159
A	G317
A	A318
A	G325

---

site_id	IC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 797

Chain	Residue
A	C435
A	A436

---

site_id	IC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 798

Chain	Residue
A	A436
A	A437
A	A438

---

site_id	IC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 799

Chain	Residue
A	G24

---

site_id	IC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 800

Chain	Residue
A	A184

---

site_id	IC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 802

Chain	Residue
A	A429
A	G430

---

site_id	JC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 803

Chain	Residue
A	G482

---

site_id	JC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 806

Chain	Residue
A	U581

---

site_id	JC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 807

Chain	Residue
A	A433
A	G434

---

site_id	JC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 808

Chain	Residue
A	HOH901
A	HOH902
A	HOH903
A	HOH904
A	HOH905
A	HOH906

---

site_id	JC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 809

Chain	Residue
A	HOH907
A	HOH908
A	HOH909
A	HOH910
A	HOH911
A	HOH912

---

site_id	JC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 810

Chain	Residue
A	HOH913
A	HOH914
A	HOH915
A	HOH916
A	HOH917
A	HOH918

---

site_id	JC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 811

Chain	Residue
A	HOH919
A	HOH920
A	HOH921
A	HOH922
A	HOH923
A	HOH924

---

site_id	JC8
Number of Residues	9
Details	BINDING SITE FOR RESIDUE MG A 812

Chain	Residue
A	A211
A	G231
A	A232
A	HOH925
A	HOH926
A	HOH927
A	HOH928
A	HOH929
A	HOH930

---

site_id	JC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 813

Chain	Residue
A	HOH931
A	HOH932
A	HOH933
A	HOH934
A	HOH935
A	HOH936

---

site_id	KC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 814

Chain	Residue
A	HOH937
A	HOH938
A	HOH939
A	HOH940
A	HOH941
A	HOH942

---

site_id	KC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 815

Chain	Residue
A	HOH943
A	HOH944
A	HOH945
A	HOH946
A	HOH947
A	HOH948

---

site_id	KC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 816

Chain	Residue
A	HOH949
A	HOH950
A	HOH951
A	HOH952
A	HOH953
A	HOH954

---

site_id	KC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 817

Chain	Residue
A	HOH955
A	HOH956
A	HOH957
A	HOH958
A	HOH959
A	HOH960

---

site_id	KC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 818

Chain	Residue
A	HOH961
A	HOH962
A	HOH963
A	HOH964
B	HOH201
B	HOH202

---

site_id	KC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 819

Chain	Residue
A	U328

---

site_id	KC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 820

Chain	Residue
A	HOH965
A	HOH966
A	HOH967
A	HOH968
A	HOH969
A	HOH970

---

site_id	KC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 821

Chain	Residue
A	HOH971
A	HOH972
A	HOH973
A	HOH974
A	HOH975
A	HOH976

---

site_id	KC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE NA A 822

Chain	Residue
A	G421
A	G550

---

site_id	LC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE NA A 824

Chain	Residue
A	U183

---

site_id	LC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE NA A 825

Chain	Residue
A	C351
A	MG790

---

site_id	LC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE NA A 826

Chain	Residue
A	C47

---

site_id	LC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE NA A 827

Chain	Residue
A	A115
A	A152
A	G153

---

site_id	LC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE NA A 828

Chain	Residue
A	U447
A	G453

---

site_id	LC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE NA A 830

Chain	Residue
A	G469

---

site_id	LC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE NA A 831

Chain	Residue
A	A594
A	A595
A	U610

---

site_id	LC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE NA A 832

Chain	Residue
A	G63
A	A64
A	G65

---

site_id	LC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE NA A 836

Chain	Residue
A	G509
A	A586

---

site_id	MC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE NA A 837

Chain	Residue
A	C374

---

site_id	MC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG B 102

Chain	Residue
B	U5
B	A6

---