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4QS5

CRYSTAL STRUCTURE of 5-CARBOXYVANILLATE DECARBOXYLASE LIGW2 FROM NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 (TARGET EFI-505250) WITH BOUND MANGANESE AND 3-methoxy-4-hydroxy-5-nitrobenzoic acid, THE D314N MUTANT

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0016787molecular_functionhydrolase activity
A0016829molecular_functionlyase activity
A0016831molecular_functioncarboxy-lyase activity
A0019748biological_processsecondary metabolic process
A0046872molecular_functionmetal ion binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0016787molecular_functionhydrolase activity
B0016829molecular_functionlyase activity
B0016831molecular_functioncarboxy-lyase activity
B0019748biological_processsecondary metabolic process
B0046872molecular_functionmetal ion binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0016787molecular_functionhydrolase activity
C0016829molecular_functionlyase activity
C0016831molecular_functioncarboxy-lyase activity
C0019748biological_processsecondary metabolic process
C0046872molecular_functionmetal ion binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0016787molecular_functionhydrolase activity
D0016829molecular_functionlyase activity
D0016831molecular_functioncarboxy-lyase activity
D0019748biological_processsecondary metabolic process
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 401
ChainResidue
AGLU19
AHIS188
AASN314
A1DF402
AHOH695

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 1DF A 402
ChainResidue
ASER91
AHIS188
AHIS241
AASN314
ATYR317
AMN401
AHOH513
AHOH593
BARG252
BMET256
BHOH754
AGLU19
ATYR51
AARG58
ATHR90

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 403
ChainResidue
AASP41
AGLN162
APRO193
AASP194
AHOH590

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 404
ChainResidue
ATYR121
APRO122
AASP123

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 405
ChainResidue
AHIS257
AGLN258
APRO271
ALEU272
AHOH572
AHOH607

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN B 401
ChainResidue
BGLU19
BHIS188
BASN314
B1DF402
BHOH708

site_idAC7
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 1DF B 402
ChainResidue
AARG252
AMET256
BGLU19
BLEU47
BTYR51
BTHR90
BSER91
BHIS188
BALA208
BHIS241
BASN314
BTYR317
BMN401
BHOH509
BHOH571
BHOH620
BHOH709

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 403
ChainResidue
BASP307
BLYS339
BTHR343
BASN344
BLYS347

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 404
ChainResidue
BASP41
BGLN162
BPRO193
BASP194
BHOH634

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 405
ChainResidue
BTYR121
BASP123

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN C 401
ChainResidue
CGLU19
CHIS188
CASN314
C1DF402
CHOH726

site_idBC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 1DF C 402
ChainResidue
CGLU19
CTYR51
CTHR90
CSER91
CHIS188
CALA208
CHIS241
CASN314
CTYR317
CMN401
CHOH524
CHOH579
DARG252
DMET256

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 403
ChainResidue
CASP41
CGLN162
CPRO193
CASP194
CHOH663

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 404
ChainResidue
CASP307
CLYS339
CTHR343
CASN344
CLYS347

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT C 405
ChainResidue
CLEU272
CHOH666
CHOH679
CHIS257
CPRO271

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN D 401
ChainResidue
DGLU19
DHIS188
DASN314
D1DF402
DHOH710

site_idBC8
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 1DF D 402
ChainResidue
CARG252
CMET256
CHOH761
DGLU19
DTYR51
DTHR90
DSER91
DHIS188
DPHE212
DHIS241
DASN314
DTYR317
DMN401
DHOH527
DHOH711

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL D 403
ChainResidue
DASP41
DGLN162
DPRO193
DASP194
DHOH699

site_idCC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL D 404
ChainResidue
CGLU277
DTRP293
DHOH748

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL D 405
ChainResidue
DASP307
DLYS339
DTHR343
DASN344

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PDB entries from 2024-10-30

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