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4QG3

Crystal structure of mutant ribosomal protein G219V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0003723molecular_functionRNA binding
A0003735molecular_functionstructural constituent of ribosome
A0005840cellular_componentribosome
A0006412biological_processtranslation
A0006417biological_processregulation of translation
A0015934cellular_componentlarge ribosomal subunit
A0019843molecular_functionrRNA binding
A1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
APRO1
ALYS2
AHIS3
AARG8
AARG52
AARG53
ASER54
AHOH483

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
AARG210
AHOH466
ALYS46

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IPA A 303
ChainResidue
ALYS205
AGLY206

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IPA A 304
ChainResidue
ASER63

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE IPA A 305
ChainResidue
AGLY95
AGLY96
AGLU97
AGLU98
AILE99
AASN225
AHOH430
AHOH463
BHOH2430

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IPA A 306
ChainResidue
AGLY60
ATHR61
ALYS141
AHIS199

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IPA A 307
ChainResidue
ALYS205
AARG210

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IPA A 308
ChainResidue
AGLN71
ALYS157

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IPA A 309
ChainResidue
APRO65

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE BME A 310
ChainResidue
AGLU85
AGLY150
AGLU151
AARG154

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 2201
ChainResidue
BC2128
BC2129
BHOH2415

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 2202
ChainResidue
BG2112
BHOH2318
BHOH2425
BHOH2427

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 2203
ChainResidue
BC2161

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BME B 2204
ChainResidue
BC2178
BC2179
BHOH2381

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE BME B 2205
ChainResidue
BC2174
BC2175
BA2176
BHOH2375
BHOH2382

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IPA B 2206
ChainResidue
BG2110
BU2180

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE URE B 2207
ChainResidue
BC2138
BC2139
BHOH2333
BHOH2392
BHOH2470

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BME B 2208
ChainResidue
BG2133
BG2157

Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues46
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. pkhgkryrallekvdpnkiytideaahlvkelatakfd.............................................................................ETVEVHAK
ChainResidueDetails
APRO1-LYS46

site_idPS01199
Number of Residues20
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. MgaVgskLGriLGPRGlLPN
ChainResidueDetails
AMET120-ASN139

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PDB entries from 2024-07-24

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