4QFS
Structure of AMPK in complex with Br2-A769662core activator and STAUROSPORINE inhibitor
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000785 | cellular_component | chromatin |
| A | 0002842 | biological_process | positive regulation of T cell mediated immune response to tumor cell |
| A | 0003682 | molecular_function | chromatin binding |
| A | 0004672 | molecular_function | protein kinase activity |
| A | 0004674 | molecular_function | protein serine/threonine kinase activity |
| A | 0004679 | molecular_function | AMP-activated protein kinase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005770 | cellular_component | late endosome |
| A | 0005829 | cellular_component | cytosol |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0006468 | biological_process | protein phosphorylation |
| A | 0008284 | biological_process | positive regulation of cell population proliferation |
| A | 0008610 | biological_process | lipid biosynthetic process |
| A | 0009267 | biological_process | cellular response to starvation |
| A | 0009410 | biological_process | response to xenobiotic stimulus |
| A | 0009411 | biological_process | response to UV |
| A | 0009631 | biological_process | cold acclimation |
| A | 0010332 | biological_process | response to gamma radiation |
| A | 0010508 | biological_process | positive regulation of autophagy |
| A | 0010629 | biological_process | negative regulation of gene expression |
| A | 0014823 | biological_process | response to activity |
| A | 0016324 | cellular_component | apical plasma membrane |
| A | 0016607 | cellular_component | nuclear speck |
| A | 0017148 | biological_process | negative regulation of translation |
| A | 0030424 | cellular_component | axon |
| A | 0030425 | cellular_component | dendrite |
| A | 0031000 | biological_process | response to caffeine |
| A | 0031588 | cellular_component | nucleotide-activated protein kinase complex |
| A | 0031669 | biological_process | cellular response to nutrient levels |
| A | 0032007 | biological_process | negative regulation of TOR signaling |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0033554 | biological_process | cellular response to stress |
| A | 0034599 | biological_process | cellular response to oxidative stress |
| A | 0042149 | biological_process | cellular response to glucose starvation |
| A | 0042542 | biological_process | response to hydrogen peroxide |
| A | 0042557 | molecular_function | eukaryotic elongation factor-2 kinase activator activity |
| A | 0042593 | biological_process | glucose homeostasis |
| A | 0042752 | biological_process | regulation of circadian rhythm |
| A | 0043025 | cellular_component | neuronal cell body |
| A | 0043066 | biological_process | negative regulation of apoptotic process |
| A | 0043114 | biological_process | regulation of vascular permeability |
| A | 0043627 | biological_process | response to estrogen |
| A | 0044877 | molecular_function | protein-containing complex binding |
| A | 0045722 | biological_process | positive regulation of gluconeogenesis |
| A | 0045821 | biological_process | positive regulation of glycolytic process |
| A | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| A | 0046321 | biological_process | positive regulation of fatty acid oxidation |
| A | 0046326 | biological_process | positive regulation of D-glucose import across plasma membrane |
| A | 0046627 | biological_process | negative regulation of insulin receptor signaling pathway |
| A | 0047322 | molecular_function | [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity |
| A | 0050321 | molecular_function | tau-protein kinase activity |
| A | 0050870 | biological_process | positive regulation of T cell activation |
| A | 0050995 | biological_process | negative regulation of lipid catabolic process |
| A | 0055089 | biological_process | fatty acid homeostasis |
| A | 0060627 | biological_process | regulation of vesicle-mediated transport |
| A | 0061744 | biological_process | motor behavior |
| A | 0061762 | biological_process | CAMKK-AMPK signaling cascade |
| A | 0062028 | biological_process | regulation of stress granule assembly |
| A | 0070050 | biological_process | neuron cellular homeostasis |
| A | 0070301 | biological_process | cellular response to hydrogen peroxide |
| A | 0070507 | biological_process | regulation of microtubule cytoskeleton organization |
| A | 0071277 | biological_process | cellular response to calcium ion |
| A | 0071333 | biological_process | cellular response to glucose stimulus |
| A | 0071361 | biological_process | cellular response to ethanol |
| A | 0071456 | biological_process | cellular response to hypoxia |
| A | 0071466 | biological_process | cellular response to xenobiotic stimulus |
| A | 0072657 | biological_process | protein localization to membrane |
| A | 0072659 | biological_process | protein localization to plasma membrane |
| A | 0097009 | biological_process | energy homeostasis |
| A | 0106310 | molecular_function | protein serine kinase activity |
| A | 0140823 | molecular_function | histone H2BS36 kinase activity |
| A | 1903109 | biological_process | positive regulation of mitochondrial transcription |
| A | 1903749 | biological_process | positive regulation of protein localization to mitochondrion |
| A | 1903829 | biological_process | positive regulation of protein localization |
| A | 1903944 | biological_process | negative regulation of hepatocyte apoptotic process |
| A | 1904179 | biological_process | positive regulation of adipose tissue development |
| A | 1904262 | biological_process | negative regulation of TORC1 signaling |
| A | 1905691 | biological_process | lipid droplet disassembly |
| A | 1990044 | biological_process | protein localization to lipid droplet |
| C | 0004679 | molecular_function | AMP-activated protein kinase activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006110 | biological_process | regulation of glycolytic process |
| C | 0016208 | molecular_function | AMP binding |
| C | 0019887 | molecular_function | protein kinase regulator activity |
| C | 0019901 | molecular_function | protein kinase binding |
| C | 0031588 | cellular_component | nucleotide-activated protein kinase complex |
| C | 0031669 | biological_process | cellular response to nutrient levels |
| C | 0032991 | cellular_component | protein-containing complex |
| C | 0042149 | biological_process | cellular response to glucose starvation |
| C | 0043531 | molecular_function | ADP binding |
| C | 0044877 | molecular_function | protein-containing complex binding |
| C | 0045722 | biological_process | positive regulation of gluconeogenesis |
| C | 0050790 | biological_process | regulation of catalytic activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE STU A 601 |
| Chain | Residue |
| A | LEU22 |
| A | GLU100 |
| A | GLU143 |
| A | ASN144 |
| A | LEU146 |
| A | ALA156 |
| A | ASP157 |
| A | GLY23 |
| A | GLY25 |
| A | VAL30 |
| A | ALA43 |
| A | ILE77 |
| A | GLU94 |
| A | TYR95 |
| A | VAL96 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE 32H A 602 |
| Chain | Residue |
| A | LYS29 |
| A | ILE46 |
| A | LYS51 |
| A | ASP88 |
| B | ARG83 |
| B | ASP108 |
| B | VAL113 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL A 603 |
| Chain | Residue |
| A | VAL24 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL A 606 |
| Chain | Residue |
| A | SER97 |
| A | ALA149 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL B 301 |
| Chain | Residue |
| B | THR85 |
| B | ASP136 |
| site_id | AC6 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE AMP C 401 |
| Chain | Residue |
| C | HIS150 |
| C | ILE203 |
| C | ALA204 |
| C | VAL224 |
| C | SER225 |
| C | ALA226 |
| C | HIS297 |
| C | SER313 |
| C | SER315 |
| C | ASP316 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 C 402 |
| Chain | Residue |
| C | ARG69 |
| C | THR86 |
| C | THR88 |
| C | ILE149 |
| C | HIS150 |
| C | ARG151 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 C 403 |
| Chain | Residue |
| C | ARG69 |
| C | SER241 |
| C | PHE243 |
| C | HIS297 |
| C | ARG298 |
Functional Information from PROSITE/UniProt
| site_id | PS00107 |
| Number of Residues | 24 |
| Details | PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGVGTFGKVKvGkheltghk..........VAVK |
| Chain | Residue | Details |
| A | LEU22-LYS45 |
| site_id | PS00108 |
| Number of Residues | 13 |
| Details | PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VvHrDLKpeNVLL |
| Chain | Residue | Details |
| A | VAL135-LEU147 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10027","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q13131","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine; by LKB1 and CaMKK2","evidences":[{"source":"PubMed","id":"14511394","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14614828","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16054095","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16054096","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8910387","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"12764152","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q13131","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"12764152","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by autocatalysis","evidences":[{"source":"PubMed","id":"11171104","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12764152","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9305909","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22673903","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q9Y478","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9R078","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 60 |
| Details | Domain: {"description":"CBS 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00703","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 21 |
| Details | Motif: {"description":"AMPK pseudosubstrate"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"17851531","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2V92","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 7 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"17851531","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21399626","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2V8Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y8L","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by ULK1","evidences":[{"source":"PubMed","id":"21460634","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine; by ULK1","evidences":[{"source":"PubMed","id":"21460634","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |






