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4QFM

The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0001514biological_processselenocysteine incorporation
A0001731biological_processformation of translation preinitiation complex
A0003743molecular_functiontranslation initiation factor activity
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006413biological_processtranslational initiation
A0006414biological_processtranslational elongation
A0016259biological_processselenocysteine metabolic process
A0016787molecular_functionhydrolase activity
A0035368molecular_functionselenocysteine insertion sequence binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues27
DetailsBINDING SITE FOR RESIDUE GCP A 501
ChainResidue
AVAL18
AGLY96
AASN149
ALYS150
ASER184
AALA185
ALEU186
AMG502
AFMT504
AHOH617
AHOH646
AASP19
AHOH722
AHOH793
AHOH810
AHOH811
AHOH836
AHOH899
AHOH939
AHOH940
AHIS20
AGLY21
ALYS22
ATHR23
ATHR24
AMET45
ATHR46

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
ATHR23
ATHR46
AGCP501
AHOH810
AHOH940

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 503
ChainResidue
ALEU312
ASER364
ATHR365
AHOH745

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE FMT A 504
ChainResidue
AVAL153
AHIS187
APRO324
AGCP501
AHOH704
AHOH778
AHOH871
AHOH899

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 505
ChainResidue
AGLU344
AMET345
AHOH757

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 506
ChainResidue
AARG130
AFMT510
AHOH754

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 507
ChainResidue
AGLY258
ALEU259
AARG260
AASN310

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 508
ChainResidue
AARG88
AHOH635
AHOH938

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 510
ChainResidue
AARG130
AFMT506
AHOH931

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 511
ChainResidue
ATHR366
ALEU367
AARG384

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 512
ChainResidue
AFMT518
AHOH909

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 513
ChainResidue
AILE32
AALA52
AGLU53
AHOH773

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE FMT A 514
ChainResidue
AARG384

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 515
ChainResidue
AGLN165
AHOH858

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE FMT A 516
ChainResidue
AGLU252

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 517
ChainResidue
ATYR68
AASP192
AHOH666
AHOH911

site_idBC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE FMT A 518
ChainResidue
AFMT512

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 519
ChainResidue
AHOH667
AHOH715

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT A 520
ChainResidue
AASP250
ASER277
AHOH705
AHOH746
AHOH791
AHOH817

site_idCC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT A 521
ChainResidue
ATRP33
ASER35
AGLY44
AMET45
ATHR46
AHOH940

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 522
ChainResidue
AARG43
AVAL99
AHOH901

site_idCC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 523
ChainResidue
ALYS332
ATYR333
ATRP410
AHOH915

site_idCC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA A 524
ChainResidue
AMET111
AHOH726
AHOH774
AHOH825
AHOH864
AHOH894
AHOH941

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RD1
ChainResidueDetails
AASP19
AGLY44

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:16407071, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:2AHO
ChainResidueDetails
ATHR23
ATHR46

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q8U082, ECO:0000255|HAMAP-Rule:MF_00119
ChainResidueDetails
ACYS59
ACYS62
ACYS74
ACYS77

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RCY, ECO:0007744|PDB:4RD1
ChainResidueDetails
AASN149
ASER184

218853

PDB entries from 2024-04-24

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