4QCA
Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant R167AD4
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0004844 | molecular_function | uracil DNA N-glycosylase activity |
A | 0006281 | biological_process | DNA repair |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
B | 0003677 | molecular_function | DNA binding |
B | 0004844 | molecular_function | uracil DNA N-glycosylase activity |
B | 0006281 | biological_process | DNA repair |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
C | 0003677 | molecular_function | DNA binding |
C | 0004844 | molecular_function | uracil DNA N-glycosylase activity |
C | 0006281 | biological_process | DNA repair |
C | 0016787 | molecular_function | hydrolase activity |
C | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
D | 0003677 | molecular_function | DNA binding |
D | 0004844 | molecular_function | uracil DNA N-glycosylase activity |
D | 0006281 | biological_process | DNA repair |
D | 0016787 | molecular_function | hydrolase activity |
D | 0016799 | molecular_function | hydrolase activity, hydrolyzing N-glycosyl compounds |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 301 |
Chain | Residue |
A | GLY66 |
A | HOH521 |
A | ILE67 |
A | ASP68 |
A | TYR70 |
A | PRO78 |
A | PHE79 |
A | ASN120 |
A | HOH412 |
A | HOH492 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL A 302 |
Chain | Residue |
A | LYS160 |
A | HIS181 |
A | HOH526 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K A 303 |
Chain | Residue |
A | SER172 |
A | VAL174 |
A | HOH448 |
A | HOH530 |
A | HOH541 |
B | HOH474 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL B 301 |
Chain | Residue |
B | LYS160 |
B | TYR180 |
B | HIS181 |
site_id | AC5 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL C 301 |
Chain | Residue |
C | GLY66 |
C | ASP68 |
C | TYR70 |
C | PRO78 |
C | PHE79 |
C | SER88 |
C | ASN120 |
C | HOH402 |
C | HOH545 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL C 302 |
Chain | Residue |
C | LYS160 |
C | TYR180 |
C | HIS181 |
C | HOH541 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL D 301 |
Chain | Residue |
D | GLY66 |
D | ASP68 |
D | TYR70 |
D | PRO78 |
D | PHE79 |
D | SER88 |
D | ASN120 |
D | HIS181 |
D | HOH402 |
site_id | AC8 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE GOL D 302 |
Chain | Residue |
C | ALA167 |
C | ALA168 |
C | LYS169 |
C | LEU170 |
C | GLU171 |
D | ALA167 |
D | ALA168 |
D | LYS169 |
D | LEU170 |
D | GLU171 |
D | HOH481 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL D 303 |
Chain | Residue |
D | LYS160 |
D | TYR180 |
D | HIS181 |
Functional Information from PROSITE/UniProt
site_id | PS00130 |
Number of Residues | 10 |
Details | U_DNA_GLYCOSYLASE Uracil-DNA glycosylase signature. RVCVcGIDPY |
Chain | Residue | Details |
A | ARG61-TYR70 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10072 |
Chain | Residue | Details |
A | ASP68 | |
B | ASP68 | |
C | ASP68 | |
D | ASP68 |