4POQ
Structure of unliganded VP1 pentamer of Human Polyomavirus 9
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005198 | molecular_function | structural molecule activity |
| A | 0019028 | cellular_component | viral capsid |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0005198 | molecular_function | structural molecule activity |
| C | 0019028 | cellular_component | viral capsid |
| D | 0005198 | molecular_function | structural molecule activity |
| D | 0019028 | cellular_component | viral capsid |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| G | 0005198 | molecular_function | structural molecule activity |
| G | 0019028 | cellular_component | viral capsid |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| I | 0005198 | molecular_function | structural molecule activity |
| I | 0019028 | cellular_component | viral capsid |
| J | 0005198 | molecular_function | structural molecule activity |
| J | 0019028 | cellular_component | viral capsid |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA A 401 |
| Chain | Residue |
| A | GLU49 |
| A | HOH588 |
| A | HOH689 |
| B | SER217 |
| B | HOH674 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 402 |
| Chain | Residue |
| A | HIS154 |
| A | MET238 |
| A | GLN239 |
| A | HOH614 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE IPA A 403 |
| Chain | Residue |
| A | HIS154 |
| A | PHE156 |
| A | GLY226 |
| A | SER227 |
| A | HOH614 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA B 401 |
| Chain | Residue |
| B | GLU49 |
| B | HOH695 |
| C | SER217 |
| C | HOH501 |
| C | HOH575 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 402 |
| Chain | Residue |
| B | VAL122 |
| B | HIS154 |
| B | MET238 |
| B | GLN239 |
| B | HOH623 |
| B | HOH648 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE IPA B 403 |
| Chain | Residue |
| B | PHE156 |
| B | TYR225 |
| B | SER227 |
| B | HOH648 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA C 401 |
| Chain | Residue |
| C | GLU49 |
| D | SER217 |
| D | HOH639 |
| D | HOH652 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 402 |
| Chain | Residue |
| C | MET238 |
| C | GLN239 |
| C | HOH612 |
| C | HOH628 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE IPA C 403 |
| Chain | Residue |
| C | HIS154 |
| C | PHE156 |
| C | GLY226 |
| C | SER227 |
| C | HOH612 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CA D 401 |
| Chain | Residue |
| D | GLU49 |
| E | SER217 |
| E | HOH670 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO D 402 |
| Chain | Residue |
| D | VAL122 |
| D | HIS154 |
| D | MET238 |
| D | GLN239 |
| D | HOH521 |
| D | HOH655 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE IPA D 403 |
| Chain | Residue |
| D | HIS154 |
| D | PHE156 |
| D | TYR225 |
| D | SER227 |
| D | HOH655 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA E 401 |
| Chain | Residue |
| A | SER217 |
| A | HOH695 |
| E | GLU49 |
| E | HOH681 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO E 402 |
| Chain | Residue |
| E | HIS154 |
| E | MET238 |
| E | GLN239 |
| E | HOH566 |
| E | HOH635 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE IPA E 403 |
| Chain | Residue |
| E | PHE156 |
| E | TYR225 |
| E | SER227 |
| E | HOH566 |
| site_id | BC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA F 401 |
| Chain | Residue |
| F | GLU49 |
| F | HOH637 |
| F | HOH638 |
| G | SER217 |
| G | GLU220 |
| G | HOH659 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO F 402 |
| Chain | Residue |
| F | MET238 |
| F | GLN239 |
| F | HOH578 |
| site_id | BC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO F 403 |
| Chain | Residue |
| F | ARG223 |
| F | TYR225 |
| F | VAL247 |
| F | LEU248 |
| F | LEU249 |
| F | HOH633 |
| J | SER243 |
| site_id | CC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IPA F 404 |
| Chain | Residue |
| F | PHE156 |
| F | TYR225 |
| F | SER227 |
| site_id | CC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA G 401 |
| Chain | Residue |
| G | GLU49 |
| H | SER217 |
| H | HOH681 |
| H | HOH682 |
| site_id | CC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO G 402 |
| Chain | Residue |
| G | VAL33 |
| G | HOH616 |
| G | HOH633 |
| site_id | CC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO G 403 |
| Chain | Residue |
| G | HOH529 |
| G | HOH614 |
| G | VAL122 |
| G | HIS154 |
| G | MET238 |
| G | GLN239 |
| site_id | CC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE IPA G 404 |
| Chain | Residue |
| G | HIS154 |
| G | PHE156 |
| G | TYR225 |
| G | HOH529 |
| site_id | CC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA H 401 |
| Chain | Residue |
| H | GLU49 |
| I | SER217 |
| I | GLU220 |
| I | HOH634 |
| I | HOH652 |
| I | HOH656 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE IPA H 402 |
| Chain | Residue |
| H | HIS154 |
| H | PHE156 |
| H | SER227 |
| H | HOH542 |
| site_id | CC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA I 401 |
| Chain | Residue |
| I | GLU49 |
| I | HOH664 |
| J | SER217 |
| J | HOH562 |
| J | HOH650 |
| J | HOH656 |
| site_id | CC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO I 402 |
| Chain | Residue |
| I | MET238 |
| I | GLN239 |
| I | HOH590 |
| I | HOH645 |
| site_id | DC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE IPA I 403 |
| Chain | Residue |
| I | HIS154 |
| I | TYR225 |
| I | GLY226 |
| I | SER227 |
| I | HOH645 |
| site_id | DC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA J 401 |
| Chain | Residue |
| F | SER217 |
| F | HOH642 |
| F | HOH649 |
| J | GLU49 |
| site_id | DC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO J 402 |
| Chain | Residue |
| J | MET238 |
| J | GLN239 |
| J | HOH655 |
| site_id | DC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IPA J 403 |
| Chain | Residue |
| J | PHE156 |
| J | SER227 |
| J | ARG288 |
