4POQ
Structure of unliganded VP1 pentamer of Human Polyomavirus 9
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005198 | molecular_function | structural molecule activity |
A | 0019028 | cellular_component | viral capsid |
B | 0005198 | molecular_function | structural molecule activity |
B | 0019028 | cellular_component | viral capsid |
C | 0005198 | molecular_function | structural molecule activity |
C | 0019028 | cellular_component | viral capsid |
D | 0005198 | molecular_function | structural molecule activity |
D | 0019028 | cellular_component | viral capsid |
E | 0005198 | molecular_function | structural molecule activity |
E | 0019028 | cellular_component | viral capsid |
F | 0005198 | molecular_function | structural molecule activity |
F | 0019028 | cellular_component | viral capsid |
G | 0005198 | molecular_function | structural molecule activity |
G | 0019028 | cellular_component | viral capsid |
H | 0005198 | molecular_function | structural molecule activity |
H | 0019028 | cellular_component | viral capsid |
I | 0005198 | molecular_function | structural molecule activity |
I | 0019028 | cellular_component | viral capsid |
J | 0005198 | molecular_function | structural molecule activity |
J | 0019028 | cellular_component | viral capsid |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA A 401 |
Chain | Residue |
A | GLU49 |
A | HOH588 |
A | HOH689 |
B | SER217 |
B | HOH674 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 402 |
Chain | Residue |
A | HIS154 |
A | MET238 |
A | GLN239 |
A | HOH614 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE IPA A 403 |
Chain | Residue |
A | HIS154 |
A | PHE156 |
A | GLY226 |
A | SER227 |
A | HOH614 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA B 401 |
Chain | Residue |
B | GLU49 |
B | HOH695 |
C | SER217 |
C | HOH501 |
C | HOH575 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO B 402 |
Chain | Residue |
B | VAL122 |
B | HIS154 |
B | MET238 |
B | GLN239 |
B | HOH623 |
B | HOH648 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE IPA B 403 |
Chain | Residue |
B | PHE156 |
B | TYR225 |
B | SER227 |
B | HOH648 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA C 401 |
Chain | Residue |
C | GLU49 |
D | SER217 |
D | HOH639 |
D | HOH652 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 402 |
Chain | Residue |
C | MET238 |
C | GLN239 |
C | HOH612 |
C | HOH628 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE IPA C 403 |
Chain | Residue |
C | HIS154 |
C | PHE156 |
C | GLY226 |
C | SER227 |
C | HOH612 |
site_id | BC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA D 401 |
Chain | Residue |
D | GLU49 |
E | SER217 |
E | HOH670 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO D 402 |
Chain | Residue |
D | VAL122 |
D | HIS154 |
D | MET238 |
D | GLN239 |
D | HOH521 |
D | HOH655 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE IPA D 403 |
Chain | Residue |
D | HIS154 |
D | PHE156 |
D | TYR225 |
D | SER227 |
D | HOH655 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA E 401 |
Chain | Residue |
A | SER217 |
A | HOH695 |
E | GLU49 |
E | HOH681 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO E 402 |
Chain | Residue |
E | HIS154 |
E | MET238 |
E | GLN239 |
E | HOH566 |
E | HOH635 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE IPA E 403 |
Chain | Residue |
E | PHE156 |
E | TYR225 |
E | SER227 |
E | HOH566 |
site_id | BC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA F 401 |
Chain | Residue |
F | GLU49 |
F | HOH637 |
F | HOH638 |
G | SER217 |
G | GLU220 |
G | HOH659 |
site_id | BC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO F 402 |
Chain | Residue |
F | MET238 |
F | GLN239 |
F | HOH578 |
site_id | BC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO F 403 |
Chain | Residue |
F | ARG223 |
F | TYR225 |
F | VAL247 |
F | LEU248 |
F | LEU249 |
F | HOH633 |
J | SER243 |
site_id | CC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE IPA F 404 |
Chain | Residue |
F | PHE156 |
F | TYR225 |
F | SER227 |
site_id | CC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA G 401 |
Chain | Residue |
G | GLU49 |
H | SER217 |
H | HOH681 |
H | HOH682 |
site_id | CC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO G 402 |
Chain | Residue |
G | VAL33 |
G | HOH616 |
G | HOH633 |
site_id | CC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO G 403 |
Chain | Residue |
G | HOH529 |
G | HOH614 |
G | VAL122 |
G | HIS154 |
G | MET238 |
G | GLN239 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE IPA G 404 |
Chain | Residue |
G | HIS154 |
G | PHE156 |
G | TYR225 |
G | HOH529 |
site_id | CC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA H 401 |
Chain | Residue |
H | GLU49 |
I | SER217 |
I | GLU220 |
I | HOH634 |
I | HOH652 |
I | HOH656 |
site_id | CC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE IPA H 402 |
Chain | Residue |
H | HIS154 |
H | PHE156 |
H | SER227 |
H | HOH542 |
site_id | CC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA I 401 |
Chain | Residue |
I | GLU49 |
I | HOH664 |
J | SER217 |
J | HOH562 |
J | HOH650 |
J | HOH656 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO I 402 |
Chain | Residue |
I | MET238 |
I | GLN239 |
I | HOH590 |
I | HOH645 |
site_id | DC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE IPA I 403 |
Chain | Residue |
I | HIS154 |
I | TYR225 |
I | GLY226 |
I | SER227 |
I | HOH645 |
site_id | DC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA J 401 |
Chain | Residue |
F | SER217 |
F | HOH642 |
F | HOH649 |
J | GLU49 |
site_id | DC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO J 402 |
Chain | Residue |
J | MET238 |
J | GLN239 |
J | HOH655 |
site_id | DC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE IPA J 403 |
Chain | Residue |
J | PHE156 |
J | SER227 |
J | ARG288 |