4PHG
Crystal structure of Ypt7 covalently modified with GTP
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 201 |
| Chain | Residue |
| A | THR22 |
| A | THR40 |
| A | 2UJ202 |
| A | HOH324 |
| A | HOH325 |
| site_id | AC2 |
| Number of Residues | 25 |
| Details | binding site for residue 2UJ A 202 |
| Chain | Residue |
| A | LYS21 |
| A | THR22 |
| A | SER23 |
| A | TYR33 |
| A | SER34 |
| A | CYS35 |
| A | GLN36 |
| A | TYR37 |
| A | THR40 |
| A | GLY67 |
| A | ASN126 |
| A | LYS127 |
| A | ASP129 |
| A | SER158 |
| A | ALA159 |
| A | LYS160 |
| A | MG201 |
| A | HOH324 |
| A | HOH325 |
| A | HOH333 |
| A | HOH341 |
| A | SER17 |
| A | GLY18 |
| A | VAL19 |
| A | GLY20 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue YT3 A 203 |
| Chain | Residue |
| A | ASP31 |
| A | ASN99 |
| A | HOH305 |
| A | HOH306 |
| A | HOH317 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue YT3 A 204 |
| Chain | Residue |
| A | GLU49 |
| A | GLU69 |
| A | GLU106 |
| A | HOH301 |
| A | HOH308 |
| A | HOH310 |
| A | HOH318 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue YT3 A 205 |
| Chain | Residue |
| A | GLU117 |
| A | GLU131 |
| A | HOH304 |
Functional Information from PROSITE/UniProt
| site_id | PS00675 |
| Number of Residues | 14 |
| Details | SIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. VIIlGDSGVGKtsL |
| Chain | Residue | Details |
| A | VAL11-LEU24 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 18 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"1KY2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1KY3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"1KY2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
