4PHG

Crystal structure of Ypt7 covalently modified with GTP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003924	molecular_function	GTPase activity
A	0005525	molecular_function	GTP binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue MG A 201

Chain	Residue
A	THR22
A	THR40
A	2UJ202
A	HOH324
A	HOH325

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site_id	AC2
Number of Residues	25
Details	binding site for residue 2UJ A 202

Chain	Residue
A	LYS21
A	THR22
A	SER23
A	TYR33
A	SER34
A	CYS35
A	GLN36
A	TYR37
A	THR40
A	GLY67
A	ASN126
A	LYS127
A	ASP129
A	SER158
A	ALA159
A	LYS160
A	MG201
A	HOH324
A	HOH325
A	HOH333
A	HOH341
A	SER17
A	GLY18
A	VAL19
A	GLY20

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site_id	AC3
Number of Residues	5
Details	binding site for residue YT3 A 203

Chain	Residue
A	ASP31
A	ASN99
A	HOH305
A	HOH306
A	HOH317

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site_id	AC4
Number of Residues	7
Details	binding site for residue YT3 A 204

Chain	Residue
A	GLU49
A	GLU69
A	GLU106
A	HOH301
A	HOH308
A	HOH310
A	HOH318

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site_id	AC5
Number of Residues	3
Details	binding site for residue YT3 A 205

Chain	Residue
A	GLU117
A	GLU131
A	HOH304

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Functional Information from PROSITE/UniProt

site_id	PS00675
Number of Residues	14
Details	SIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. VIIlGDSGVGKtsL

Chain	Residue	Details
A	VAL11-LEU24

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	BINDING: BINDING => ECO:0007744|PDB:1KY2, ECO:0007744|PDB:1KY3, ECO:0007744|PDB:4PHF, ECO:0007744|PDB:4PHG

Chain	Residue	Details
A	SER17
A	TYR33
A	ASN126
A	SER158

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	BINDING: BINDING => ECO:0007744|PDB:1KY2, ECO:0007744|PDB:4PHG

Chain	Residue	Details
A	GLY67

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site_id	SWS_FT_FI3
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047

Chain	Residue	Details
A	LYS147

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