4PFM
SHEWANELLA BENTHICA DHDPS WITH LYSINE AND PYRUVATE
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
| A | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| A | 0009085 | biological_process | lysine biosynthetic process |
| A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| A | 0009436 | biological_process | glyoxylate catabolic process |
| A | 0016829 | molecular_function | lyase activity |
| A | 0019877 | biological_process | diaminopimelate biosynthetic process |
| A | 0044281 | biological_process | small molecule metabolic process |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
| B | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| B | 0009085 | biological_process | lysine biosynthetic process |
| B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| B | 0009436 | biological_process | glyoxylate catabolic process |
| B | 0016829 | molecular_function | lyase activity |
| B | 0019877 | biological_process | diaminopimelate biosynthetic process |
| B | 0044281 | biological_process | small molecule metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | binding site for residue LYS A 301 |
| Chain | Residue |
| A | SER48 |
| B | GLU84 |
| A | ALA49 |
| A | LEU51 |
| A | HIS56 |
| A | TYR106 |
| A | LYS302 |
| A | HOH428 |
| A | HOH470 |
| B | ASN80 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | binding site for residue LYS A 302 |
| Chain | Residue |
| A | ASN80 |
| A | GLU84 |
| A | LYS301 |
| A | HOH403 |
| B | SER48 |
| B | ALA49 |
| B | LEU51 |
| B | HIS56 |
| B | TYR106 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue GOL A 303 |
| Chain | Residue |
| A | GLU146 |
| A | ASP166 |
| A | ARG169 |
| A | GLN172 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue NA A 304 |
| Chain | Residue |
| A | VAL152 |
| A | VAL154 |
| A | ILE157 |
| A | HOH538 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue LYS B 301 |
| Chain | Residue |
| A | PRO52 |
| B | ALA81 |
| B | GLU84 |
| B | GLU87 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue FLC B 302 |
| Chain | Residue |
| B | TRP254 |
| B | HIS279 |
| B | HOH413 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | binding site for residue GOL B 303 |
| Chain | Residue |
| B | LYS94 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue NA B 304 |
| Chain | Residue |
| B | VAL152 |
| B | VAL154 |
| B | PRO155 |
| B | ILE157 |
| B | HOH540 |
Functional Information from PROSITE/UniProt
